Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0936 ATGAACTACAGGGGTAGTTTACGAAAGGACCAACCGACTCTGGGAGAAGGCATCAGTTGGCAGATGATAGTTCAAATACAGCATTTCACACACGATACGACCGCAAACAACCTCTCTCTCTCCTCTGACTCTCCATCTTCCTTTAATACTGTACTTGCTTTCGCTTTCCTCAATTGTTACCTACTGTTTTCCAATCTATCCAAGGAAACCTGGTTTTTGTCGAAGGAGACAGCGATTTCCTCGTCAGGATCGGTGAAACTAAGTCCTCGGGCTAGAGTGCTTGTGACCTTTCCCCCTTGGTTTGTGGTTTTTCATGGTCAGCCTCAAGATGAGACAGGATGCCATACTCCGGAAAAACCAATGCTCTGCGTCAATAATTGTGGCTTCTTTGGGAGGGCTACTACCATGAATATGTGTTCAAAGTGTTACAAGGACACGCTGTTGAAGCAGGAGCAGGTAAAAATTGCTGCATCATCAGTTGAAAGCATCGTGAATGGCAGCTCTAGCAGCAACGGAGAAGAGGTTGTGAATATAATTGCTACAGATGTACAAGTTGGAACAATGGAAGTCAAGCCAGTTGGTGCTCAACTTTCTGAGGATTCATCCTCTAGTGAGGCTCTGGAGGTGAAAGCCAAGACAGGCCCCAGCAGATGTGCCACTTGCCAGAAGCGAGTTGGCTTAACTGGTTTCAGCTGTAAATGTGGGAACCTCTTTTGTGCAATGCATCGCTACTCTGACAAACATGACTGCCCTTTTGATTATCGGACTGTTGGTCAGGATGCTATAGCTAAAGCCAATCCTGTAATAAAGGCAGAAAAGCTTGACAAAATCTAG 834 0.4556 MNYRGSLRKDQPTLGEGISWQMIVQIQHFTHDTTANNLSLSSDSPSSFNTVLAFAFLNCYLLFSNLSKETWFLSKETAISSSGSVKLSPRARVLVTFPPWFVVFHGQPQDETGCHTPEKPMLCVNNCGFFGRATTMNMCSKCYKDTLLKQEQVKIAASSVESIVNGSSSSNGEEVVNIIATDVQVGTMEVKPVGAQLSEDSSSSEALEVKAKTGPSRCATCQKRVGLTGFSCKCGNLFCAMHRYSDKHDCPFDYRTVGQDAIAKANPVIKAEKLDKI 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0936 277 PANTHER AN1-TYPE ZINC FINGER PROTEIN 118 277 - -
Lele07g0936 277 SUPERFAMILY AN1-like Zinc finger 206 272 IPR035896 -
Lele07g0936 277 Pfam A20-like zinc finger 121 144 IPR002653 GO:0003677|GO:0008270
Lele07g0936 277 ProSiteProfiles Zinc finger A20-type profile. 117 151 IPR002653 GO:0003677|GO:0008270
Lele07g0936 277 FunFam Zinc finger AN1-type containing 6 194 273 - -
Lele07g0936 277 Gene3D - 109 172 - -
Lele07g0936 277 SMART AN1_Zf_4 218 255 IPR000058 GO:0008270
Lele07g0936 277 Gene3D - 193 273 IPR035896 -
Lele07g0936 277 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 122 160 - -
Lele07g0936 277 ProSiteProfiles Zinc finger AN1-type profile. 212 258 IPR000058 GO:0008270
Lele07g0936 277 SMART A20_3 120 144 IPR002653 GO:0003677|GO:0008270
Lele07g0936 277 Pfam AN1-like Zinc finger 218 254 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0936 Lele-ChrLele07 5599917 5601636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0936 110 277 C2H2 Transcription Factor Family AT3G52800 42.690 7.79e-37 127