Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0934 ATGGGGACCGACAATGGTGATGCCAGGTCAAAGATGGAAGACTATGAAGTGATACAGCAACTTGGTAGAGGAACACTGGGCATCTCCTTTCTTGTTCTCCATAAGTCTGAGAAAAAGAAGTATGTGCTGAAGAAGATTCGCTTGGCTAAGCAAATCGATAAGTCTAAACGTACAGCGCTGCAAGAGATGAACCTGATTTCAAAACTAAATAACCCATATATCGGGGAGTACAAAGATGCCTGGATGGAAAAGGAGGACTGCATGTGCATTATAGCTGGCTATTGTGAAGGAGTTAACATGGCTGAGATGATAAAGAGAGCCCGGGGATCTTTTTTCTCTGAGGAGAAAATCTGCAAATGGCTGACTCAATTATTACTTGCCGTGGACTATTTGCATTCTAATCGTGTCCTCCATGGAGATCTTAAGTGTTCCAACATATTCCTTTCCAAAGGCAGTGACATTCGACTTGGTGACTTTGGTCTTGCAAAACTACTTAAACCAGAAGACCTTGCTTCCTCGGGTGTGGGAACTCCAAACTACATGTGTCCTGAGCTCCTTGAAAATATACCTTATGGTTATAAATCTGATATATGGTCGCTTGGTTGTTGCATGTTTGAAATTGCTGCACATCAACCTGCATTTCGTGCTCCAGACAAAGCCGGGCTTATCCATAAGATAAATAGATCCTCCATTTCTCCACTGCCAATAGTTTATTCGTCCACACTGAAACAAATTATCAAGAGCATGCTGAGGAAGAATCCAGAACACAGACCAACAGCACTGGAATTGTTAAGGCATCCCCATTTACAACCATATGTCCTCCGCTGTCGGAATGCATCGGCTATCCTTCTTCCTATAAAATCTGAATGTAGCCTAAATAGTAGCCCAAATAATAAAACAAAAGGATCTTATAGGTCTGGTGATGGCAAAGACCATAGGGACAAAGAAGTAGGGGGATTAACTAATCGATTGGAGAGGGTTCATCTATTTGAGGCAAATGGTAATGTACATCAAAGCAGTGTTCCTAAGCGAACAGTTTCATCCTGTGTAGAAGACAACCTTGAGACTAACATGGTTGATCCCACCAGCTACATTGTGGAATCATGTTCAAGTATTAGTGGCTCAAAAGCCGGCTCTACGACATCTGAATCTACTGTTAGTAGTGCGTTCAAGGAAATAGACTTTAAAATTAAACCTGCAAGTGAAACAGTTGATAACGAAGTTACATCAGCAACAATTCCAGAAGATTCTGAGCATGAAGAACCAGGATTGAATGCTGAAACTTTGCAAAAATCAGAAAGGATTGACATAGATGCAGTGGCCACAAATGTGAAAGGTATGCTTTCCTATGATGGTTCCACCGAAGCCAAGGGACAGAGGGAAGGTACCATACCTGAGGACTCCAAGAAACCAATAATGTCCTATGCAGGCAGCTATTATGAAGATGGATCCATTGAGGAAACATTAAAACCACCACCACCACCCCTGCAGCCGGTTAGGGTTAGGGTCGAACAGGACACCGAACCAGAAGGCCTTCACTTGGACTGTTTGTCTTCTGAGAGTAATGATAAACTTGCAGGTAAAGCTGGAGGCCAAGCAAGAACACTTGAGGCCACTTGCTCCATGCATAAAGAGAATGAAACTGCTAGTGAGGTTGATCAAATACCAAGTGGGCTTTCATCAAGCAAACCTGCCGCGATCAGTGATGAAACCATGACTGTGCTGGAGAAACCAGGTGAGCAAAGAGCTGATGCTCTGGAGTCTCTGCTTGAGTTATGTGCTCAGTTATTTAAGCAGGACAAACTTGATGAGCTTGCTCGTGTGCTTGGACCATTTGGGCATGAAGCTGTCTCATCCAGAGAGACAGCAATATGGTTGACAAAGAGCCTCATATCTGCACAAAAAAAATTTAACACAGAAACCTAG 1926 0.4304 MGTDNGDARSKMEDYEVIQQLGRGTLGISFLVLHKSEKKKYVLKKIRLAKQIDKSKRTALQEMNLISKLNNPYIGEYKDAWMEKEDCMCIIAGYCEGVNMAEMIKRARGSFFSEEKICKWLTQLLLAVDYLHSNRVLHGDLKCSNIFLSKGSDIRLGDFGLAKLLKPEDLASSGVGTPNYMCPELLENIPYGYKSDIWSLGCCMFEIAAHQPAFRAPDKAGLIHKINRSSISPLPIVYSSTLKQIIKSMLRKNPEHRPTALELLRHPHLQPYVLRCRNASAILLPIKSECSLNSSPNNKTKGSYRSGDGKDHRDKEVGGLTNRLERVHLFEANGNVHQSSVPKRTVSSCVEDNLETNMVDPTSYIVESCSSISGSKAGSTTSESTVSSAFKEIDFKIKPASETVDNEVTSATIPEDSEHEEPGLNAETLQKSERIDIDAVATNVKGMLSYDGSTEAKGQREGTIPEDSKKPIMSYAGSYYEDGSIEETLKPPPPPLQPVRVRVEQDTEPEGLHLDCLSSESNDKLAGKAGGQARTLEATCSMHKENETASEVDQIPSGLSSSKPAAISDETMTVLEKPGEQRADALESLLELCAQLFKQDKLDELARVLGPFGHEAVSSRETAIWLTKSLISAQKKFNTET 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0934 641 SUPERFAMILY Protein kinase-like (PK-like) 12 304 IPR011009 -
Lele07g0934 641 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0934 641 Gene3D Phosphorylase Kinase; domain 1 2 94 - -
Lele07g0934 641 CDD STKc_Nek 14 269 - -
Lele07g0934 641 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0934 641 Gene3D Transferase(Phosphotransferase) domain 1 97 316 - -
Lele07g0934 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele07g0934 641 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0934 641 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 12 590 - -
Lele07g0934 641 MobiDBLite consensus disorder prediction 294 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0934 Lele-ChrLele07 5588083 5592960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0934 21 270 MAP Kinase Kinase Kinase AT1G53570 32.157 6.02e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Lele07g0934 Pkinase 2.7e-61 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0934 07 5588083 5592960 Lele07g0934 07 5588083 5592960 ECH
Lele05g0895 05 5519534 5524394 Lele07g0934 07 5588083 5592960 hybridization
Lele06g0754 06 4654920 4666817 Lele07g0934 07 5588083 5592960 hybridization