Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0896 ATGGCTTCCTCTTCCTCTGACCCTAGCAAGTCTGAAGTTGGCTGCTGCGGCGGCGGCGGTAGTGCAGATGTTTCGGATGCAGCGAAGGCAAATGATAAGCTCTTGCTCTATAGGGGATTGAAGAAAGCGAAGAAAGAAAGAGGGTGTACAGCTAAAGAGCGCATCAGCAAGATACCTCCTTGTGCTGCGGGGAAACGCAGCTCCATATATCGTGGGGTCACCAGGCATAGATGGACTGGTCGTTATGAGGCCCATCTTTGGGATAAAAGTACATGGAACCAAAATCAGAATAAAAAGGGAAAACAAGGCGCATATGATGATGAGGAGGCCGCAGCTAGAGCTTATGACCTTGCTGCTCTGAAATATTGGGGTCCGGGGACTCTAATCAACTTTCCAGTGACTGATTATACAAGAGATCTTGAAGAAATGCAAAATTTTTCAAGAGAGGAATACCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCTAGAGGAATCTCTAAATATCGTGGACTCTCCAGCGGCCGATGGGAGCCATCATATGGTAGAATGGCTGGATCTGATTACTTCAACAGTATACATTATGGGGATGATTCAGCAGCAGAAAGCGAATATGTTAGTGGTTTCTGCATAGAACGAAAGATTGATTTAACAAATTACATCAAGTGGTGGGGATCCAATAAAAGTCGCCAACCTGATGCTGGAACAAAATCATCAGAAGAAAAAAAGCAAGGATTTGCGGGAGATATTTGTGGTGAGCTCAAAACGCTGGAACAGGAACTCCAACCCACTGAACCATACCAGATGCCACAGTTAGGCTTACCCCATGATCGGAAAAAGCATAAAAGTTCTGCAGTCTCTGCCTTAAGTATTTTATCACGGTCAGTAGCATTCAAGAGCCTGCAAGAGAAGGCGTCAAAGACACAAGAAAATTACACTGATAATGATGAGGATGAGAACAAAAATACCATCAATAAGTTGGACCATGGCAAGGCACTTGAGAGATCACCAAATCATAATGGTGTGGATGAAAGACTTGACATTGCAATGGGAATGAGCGGGGCATTGTCTATTCAAAGAAATGTTTACCCGTTGACTTCATTCTTGTCTGCACCACTTTTGACAGCCTATAATACTGCAGATCCCATGCTAGATCCTGTTCTCTGGACATCTCTTGTTCCTATACTCCCTTCTGGCCTTTCTCGGACAGCCGAGGTTACCAAGACTGAGAGCAGTTCAACTTACACCATATTTCACCCGGAGGAGTGA 1269 0.4476 MASSSSDPSKSEVGCCGGGGSADVSDAAKANDKLLLYRGLKKAKKERGCTAKERISKIPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNFSREEYLASLRRKSSGFSRGISKYRGLSSGRWEPSYGRMAGSDYFNSIHYGDDSAAESEYVSGFCIERKIDLTNYIKWWGSNKSRQPDAGTKSSEEKKQGFAGDICGELKTLEQELQPTEPYQMPQLGLPHDRKKHKSSAVSALSILSRSVAFKSLQEKASKTQENYTDNDEDENKNTINKLDHGKALERSPNHNGVDERLDIAMGMSGALSIQRNVYPLTSFLSAPLLTAYNTADPMLDPVLWTSLVPILPSGLSRTAEVTKTESSSTYTIFHPEE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0896 422 SMART rav1_2 69 138 IPR001471 GO:0003700|GO:0006355
Lele07g0896 422 Gene3D AP2/ERF domain 69 134 IPR036955 GO:0003700|GO:0006355
Lele07g0896 422 MobiDBLite consensus disorder prediction 304 340 - -
Lele07g0896 422 FunFam AP2-like ethylene-responsive transcription factor 68 134 - -
Lele07g0896 422 Pfam AP2 domain 69 124 IPR001471 GO:0003700|GO:0006355
Lele07g0896 422 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Lele07g0896 422 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Lele07g0896 422 SUPERFAMILY DNA-binding domain 68 133 IPR016177 GO:0003677
Lele07g0896 422 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 32 303 - -
Lele07g0896 422 ProSiteProfiles AP2/ERF domain profile. 69 132 IPR001471 GO:0003700|GO:0006355
Lele07g0896 422 MobiDBLite consensus disorder prediction 1 25 - -
Lele07g0896 422 MobiDBLite consensus disorder prediction 309 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0896 Lele-ChrLele07 5304521 5308322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0896 30 406 AP2-EREBP Transcription Factor Family AT2G41710 64.781 1.17e-160 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g0896 AP2 2.1e-09 CL0081