Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0888 ATGGAGAGTCTGTTGTTGAAAGATTTCGTAATCGAGCACAAGAGACCATCTATTGAAGCCTCGAAGCGATGGAGATCCGCCGTCGCTTTAGTAAAGAACCACCGCAGACGCTTCCGCATGGTCCCAGATCTCCAGAAACGTTCCGAAGCCGAACAAACAAGGAAGCAAATCCAGGATAAAGTTCGAGTTGCTCTCTTTGTTCAAAAGGCAGCACTGCACTTTATTAGTGCTGGACGCCAAGTACCAGAAGAGGTGAGAGAAGCTGGTTTTGGCATTGATCCTGAAGTGGTTGCATCCATCGTTCACGGCCACGATCATGAAGCATTGAAAAAACAAGGTGGAGTCAAAGAAATTGCAACAAAACTCTCTTCCTCAGTGGACAAAGGTATTAACGAAGGCAGTGTACATACAAGGCAACAAGTTTATGGATTCAACCGTTACACAGAAAAACCTCCCAGGAGCTTCCTGATGTTTATGTGGGAAGCACTGCATGATTTAACCCTAATAATTCTCATGGTTTGTGCTGTAGTTTCCATTGGGGTAGGGATAGCCACTGAACCGTGGCCCGAGGGTATGTATGATGGTTTAGGAATCATACTCAGTGTATTTTTGGTAGTAATTGTTACTGCTTTTAGTGACTACCAACAATCCTTACAGTTCAGGGCTTTAGACAAGGAGAAGAAGAAAATCTTCGTCCATGTCATCAGAAATGAAAAAAGACAAAAGATTTCAATTTATGACGTGGTAGTGGGAGATATTGTTTATTTGGCAACTGGGGATCAAGTTCCAGCTGATGGGATTTACATATCTGGATACAACTTATTGATTGATGAATCAAGCTTGACAGGTGAGAGTGAGCCAGTAAATGTGCATGAAGAAGACAAACCATTTCTTCTTTCAGGAACCAAAGTGCAAGATGGTCAAGGGAAAATGTTAGTGACAAGCGTTGGAATGAGGACTGAATGGGGAAAACTAATGGAAACTTTAAACGATGGGGAAGAAGACGAGACCCCATTGCAAGTGAAACTGAATGGAGTTGCTACAATTATTGGTAAACTTGGTTTAACTTTCGCAGTGCTGACATTTTTGGTGCTAACAATAAGGTTTGTGGTGGAAAAGGCAATTCATGGTGATATTACTTATTGGTCATCAAATGATGCAGTAAAGCTGCTAAACTTTTTTGCTATTTCTGTTACAATAATAGTTGTTGCAGTTCCCGAAGGGTTACCTTTGGCAGTGACACTTAGTCTTGCTTTTGCAATGAAAGAATTAATGAATGAAAGAGCACTTGTGAGGCATCTTTCTGCATGTGAGACAATGGGTTCAGCGAGTTCTATTTGCACAGATAAGACAGGCACATTAACCACTATGCATATGGCGGTTGATAAAATATGGATATGTGAAAAAGCCATGGAAATCAAAGGAAACAATATTGAAAGTGGAGTAGCCAAACTAAAACAAGAGATATCTGAAGGAGTTGTAGACGTTCTTTTGCAAGCCATATTTCAGAATACTTCTTCTGAAGTAGTTGAGGATAGAGATGGAAAGAACTCAATACTGGGAACGCCAACAGAATCGGCATTATTGGAATTTGGCTTGCTTTTGGGTGGTGATTTTGATGCCCAGCGCAGAGATTATAGGATACTTGAGATTGAGCCTTTTAATTCAGTTCGAAAGAAGATGTCTGTTATTGTAGGTCTTCCTGAAGGAGGAGGGACACGAGCTTTCTGCAAAGGTGCATCAGAGATAATATTAACAATGTGTGACAAATTTATTGACTGCAATGGAGAAACCATTGATCTTCTTGAAGACCAAGCAAAGAATGTTTCTAAAGTTATAAACATTTTTGCCTCGGAAGCTTTAAGAACTCTTTGTCTGGCATTCAAAGATATGAATGAAAACCAAGGGAAAACGGCGAGTATCATCCCTGATAATGGCTACACACTGATAGCCATTGTAGGAATCAAAGATCCTGTGCGCCCTGAGGTGAAGAACGCTGTTCAAACTTGTTTAGCAGCCGGAACAACTGTTCGTATGGTCACTGGAGATAACATAAACACTGCTAAGGCTATAGCTAAAGAATGTGGCATCCTCACGGAAGATGGTATAGCCATTGAAGGACCAGAATTTCGCAACTTCTCGCCTGAACAAATGAAGCATTTGATACCAAGAATCCAGGTCATGGCACGAGCCTTGCCGCTTGATAAGTATAACTTGGTATCCCATTTGAGGAATACGTTTGGTGAAGTTGTTGCTGTTACCGGTGATGGAGCCAACGATGCTCCGGCACTGCATGAAGCAGATATTGGACTTGCCATGGGCATCGCTGGAACAGAGGTTGCCAAACAAAATGCAGATGTGATCATAATGGATGATAACTTCAAGACAATTGTGAGAGTGGCCAGTTGGGGACGGGCAGTGTACAGGAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTAAATGCTGTTGCTCTTGTGATCAACTTTGTTTCTGCATGCATCACAGGATCTACACCACTAACAGCTCTGCAATTACTATGGGTGAACATGATTATGGACACTTTAGGGGCTCTAGCCCTAGCCACCGAGCCTCCTCATGATGGGCTTATGAAAAGACCCCCAGTTGCAAAGGGGGCAAGTTTTATCACCAAAACCATGTGGAGGAATATCATTGGACAAAGTATATATCAGTTAATTGTCCTTGCCATTCTCAATTTTGAAGGCAAGAGGCTTCTCAGAATCACCGGTTCAGATGCAACTATCCTCCTCAACACTTTGATCTTCAACTCCTTTGTTTTTTGCCAGGTGTTCAATGAGATTAACAGCCGAGATATAGAAAAGATAAACGTGTTGAGAGGCATAATAAAGAGCTGGATATTTATAGGGATAATTTGCATAACAGTCGGATTTCAAGTAATCATAGTTGAGTTTCTGGGGAAACTTGCTAGCACAGTGCCTCTGAACTGGAAACTCTGGTTACTCAGTATCTTGATTGGAGCAATCAGCATGCCAATATCTGCAATTGTCAAGTGCATCCCAGTTGAAACAGATTCATCAATACTCCAACATCATCATGATGGCTACCAGGAATTGCCTTCTGATCCCCATCAGCTAGCATAG 3123 0.4166 MESLLLKDFVIEHKRPSIEASKRWRSAVALVKNHRRRFRMVPDLQKRSEAEQTRKQIQDKVRVALFVQKAALHFISAGRQVPEEVREAGFGIDPEVVASIVHGHDHEALKKQGGVKEIATKLSSSVDKGINEGSVHTRQQVYGFNRYTEKPPRSFLMFMWEALHDLTLIILMVCAVVSIGVGIATEPWPEGMYDGLGIILSVFLVVIVTAFSDYQQSLQFRALDKEKKKIFVHVIRNEKRQKISIYDVVVGDIVYLATGDQVPADGIYISGYNLLIDESSLTGESEPVNVHEEDKPFLLSGTKVQDGQGKMLVTSVGMRTEWGKLMETLNDGEEDETPLQVKLNGVATIIGKLGLTFAVLTFLVLTIRFVVEKAIHGDITYWSSNDAVKLLNFFAISVTIIVVAVPEGLPLAVTLSLAFAMKELMNERALVRHLSACETMGSASSICTDKTGTLTTMHMAVDKIWICEKAMEIKGNNIESGVAKLKQEISEGVVDVLLQAIFQNTSSEVVEDRDGKNSILGTPTESALLEFGLLLGGDFDAQRRDYRILEIEPFNSVRKKMSVIVGLPEGGGTRAFCKGASEIILTMCDKFIDCNGETIDLLEDQAKNVSKVINIFASEALRTLCLAFKDMNENQGKTASIIPDNGYTLIAIVGIKDPVRPEVKNAVQTCLAAGTTVRMVTGDNINTAKAIAKECGILTEDGIAIEGPEFRNFSPEQMKHLIPRIQVMARALPLDKYNLVSHLRNTFGEVVAVTGDGANDAPALHEADIGLAMGIAGTEVAKQNADVIIMDDNFKTIVRVASWGRAVYRNIQKFVQFQLTVNAVALVINFVSACITGSTPLTALQLLWVNMIMDTLGALALATEPPHDGLMKRPPVAKGASFITKTMWRNIIGQSIYQLIVLAILNFEGKRLLRITGSDATILLNTLIFNSFVFCQVFNEINSRDIEKINVLRGIIKSWIFIGIICITVGFQVIIVEFLGKLASTVPLNWKLWLLSILIGAISMPISAIVKCIPVETDSSILQHHHDGYQELPSDPHQLA 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0888 1040 Pfam Cation transporting ATPase, C-terminus 839 1012 IPR006068 -
Lele07g0888 1040 Gene3D - 444 799 IPR023214 -
Lele07g0888 1040 Pfam Ca2+-ATPase N terminal autoinhibitory domain 7 49 IPR024750 GO:0005516
Lele07g0888 1040 Gene3D - 16 76 - -
Lele07g0888 1040 Pfam Cation transport ATPase (P-type) 506 590 - -
Lele07g0888 1040 SMART Cation_ATPase_N_a_2 108 183 IPR004014 -
Lele07g0888 1040 Gene3D - 128 330 - -
Lele07g0888 1040 PRINTS H+-transporting ATPase (proton pump) signature 725 741 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele07g0888 1040 PRINTS H+-transporting ATPase (proton pump) signature 786 811 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele07g0888 1040 PRINTS H+-transporting ATPase (proton pump) signature 754 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele07g0888 1040 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele07g0888 1040 ProSitePatterns E1-E2 ATPases phosphorylation site. 449 455 IPR018303 -
Lele07g0888 1040 Gene3D - 161 1013 - -
Lele07g0888 1040 SFLD Haloacid Dehalogenase 429 806 - -
Lele07g0888 1040 SFLD p-type atpase 429 806 IPR044492 -
Lele07g0888 1040 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 658 IPR023299 GO:0000166
Lele07g0888 1040 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 724 841 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele07g0888 1040 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 198 470 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele07g0888 1040 FunFam Calcium-transporting ATPase 771 1017 - -
Lele07g0888 1040 Pfam E1-E2 ATPase 231 426 - -
Lele07g0888 1040 FunFam Calcium-transporting ATPase 457 658 - -
Lele07g0888 1040 SUPERFAMILY Calcium ATPase, transmembrane domain M 113 1014 IPR023298 -
Lele07g0888 1040 Gene3D - 457 658 IPR023299 GO:0000166
Lele07g0888 1040 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 107 1016 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele07g0888 1040 CDD P-type_ATPase_Ca_PMCA-like 138 887 - -
Lele07g0888 1040 PANTHER CATION TRANSPORTING ATPASE 58 1015 - -
Lele07g0888 1040 Pfam Cation transporter/ATPase, N-terminus 112 178 IPR004014 -
Lele07g0888 1040 FunFam Calcium-transporting ATPase 161 218 - -
Lele07g0888 1040 FunFam Calcium-transporting ATPase 206 330 - -
Lele07g0888 1040 FunFam Calcium-transporting ATPase 651 799 - -
Lele07g0888 1040 SUPERFAMILY HAD-like 446 859 IPR036412 -
Lele07g0888 1040 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Lele07g0888 1040 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Lele07g0888 1040 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Lele07g0888 1040 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Lele07g0888 1040 PRINTS P-type cation-transporting ATPase superfamily signature 447 461 - -
Lele07g0888 1040 PRINTS P-type cation-transporting ATPase superfamily signature 277 291 - -
Lele07g0888 1040 SUPERFAMILY Calcium ATPase, transduction domain A 231 328 IPR008250 -
Lele07g0888 1040 FunFam Calcium-transporting ATPase 16 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0888 Lele-ChrLele07 5240786 5247143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0888 57 1040 Primary Pumps ATPases AT3G57330 68.117 0.0 1380