Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele07g0886 | ATGGATCACAAAAGGCAATTCAAGGACTCGCTCTCGTACTCTAGTCTTTTCAATCTCGAGCCTTTGATGAATTTTCAACTTCCACAAGAAGATGATGATTTTGACTATAATGGGAATAGTAGTCAGGATGAGAGCAGAGATAGCCAAGGTGGGGCAATCGCAAATCACATCAATGGGAGTATGCGTGGAAGGGAGGTAAATTTGCTGAAGAAGAGGAAGTGGTCTCAAAACAGTGACGACGAAGACAAGGGTAATTTTTGTGGAACGCACATGACTGAGGAGCGATACCGATCAATGCTTGGGGAACATGTTCAAAAATACAAGAGGAGGTATAAAGATACCTCATCTAGTCCTGCCCAAAATCGAGGACAACTTCTTAAAAGTAACACAGGTTTGAAAGCGCGGAAGTTAGCGAATGAGCATCGAGGAGGAACACATGCTCTGGAGACTACACTCGAGTGGCCTAATGATATTAATCCTCATAAACCTGTAATCTACCGTGATGCAGAATTCAGACAGCAATATGGACCTGATAGAACTATCTATGAACCGGCTTCTTTAGATATTGGAGATGGTGTTACTTACAAAATCCCTCCTCCTTATGATAAGTTAGCCGCAATGCTGAACCTTCCAAGTTTCTCAGATATTCGAGTTGAGGAGTTTTACTTAAAGGGTACCTTGGATTTGGGATCCTTGGCTGCAATGATGGCTTCTGATAAGAAGGGTGGGACTAGAAACCGAGCAGCCATGGGGGAAACCTTACCTCAATATGATTCACTTCAGGCACGATTGAAGGCCATGTCAGCTTCTAATTCACCTCATCAATTTAGTCTGAAAGTATCTGATATCGGTTTGAATTCTTCAATCCCTGAGGGAGCTGCTGGAAATATTAAGAGAACTATTTTGTCTGAGGGCGGTGTATTGCAGGTTTATTATGTGAAGGTTTTAGAGAAAGGTGACACATATGAGATCATTGAAAGAAGCCTACCTAAGAAGCAAAAGGTAAATAAAGACCCTTCTTTGATTGAGAAGGAGGAAATGGAAAGAATTGGAAAAATCTGGGTAAATATTGTAAGAAGAGACATACCAAAGCATCATAGGTTTTTTACTGGTTTCCATCGAAAGCAACTTGTTGATGCCAAGAGGTTCTCAGAGAACTGTCAAAGAGAGGTCAGAATGAAAATGAGCAGATCACTTAAATTCATGAAAAGTGCACCCATTCGCACCCGAAAACTAGCCAGAGATGTCTTGCTGTTCTGGAAACGAGCAGATAAGGAGATGGCAGAATTGAGGAAAAAAGAGGAGAAAGAAGTTGCAGAAGCTTTGAGGCGTGAACAGGAGCTTCGAGAAGCAAAGAGGCAGCAGCAAAGGCTGAATTTCCTTATACAGCAAACTGAGCTATACAGTCACTTTATGCAGAACAAGTCGAACTTACTTTCCTCTGATGCATTACCTACAGTAGATGAAAAAGCAGATGATCAAGACGCAGAACTTGGCTCTTCAGATGCTGGGCCTAGTGGGGAGGAAGATCCCGAAGAGGCTGAACTGAAGAAGGAAGCTATGAAGGCTGCTCAAGAAGCTGTCTCTAAGCAGAGAAAGTTGACGAGTGCTTTCGATAGTGAATGCTTGAGGCTGCGTCAGGCTGGTGAAACCGATGCACTTTCACAGGAAGTTGCAGGAGCGAGTAACATTGATTTGCAAACCCCCTCAACCATGCCTGTGGCATCAACAGTTCGGACGCCAGAAATGTTTAGAGGCACTCTTAAAGAATATCAGCTAAAAGGTCTTCAGTGGTTAGTTAATTGTTATGAGCAGGGTCTGAATGGTATACTTGCTGATGAAATGGGACTTGGAAAGACCATTCAAGCCATGGCTTTTTTAGCTCATTTAGCTGAGGAGAAAAATATATGGGGACCATTTTTGGTTGTTGCACCTGCGTCAGTATTGAACAATTGGAATGAAGAACTTGAGCGCTTCTGCCCTGAAATGAAAGCTCTTCCTTACTGGGGTGGGCTTCATGAGCGGACAGTACTTAGGAAAAGTATTAACCCAAAGGATCTTTATCGTAGGGATGCAAAATTCCACATTCTCATTACAAGCTACCAGCTACTAGTATCTGATGAGAAGTATTTTCGGCGTGTGAAATGGCAGTACATGGTATTAGATGAAGCCCAGGCAATTAAAAGTGCAAACAGTATAAGATGGAAGACACTTCTCAGTTTTAATTGTCGGAATCGCCTGCTGCTGACTGGTACACCAATTCAAAATAATATGGCAGAATTGTGGGCTCTTCTGCACTTCATTATGCCAACTTTATTCGATAGCCATGAACAGTTTAATGAATGGTTTTCAAAAGGAATTGAGAACCATGCAGAACATGGAGGTACTCTGAATGAGCATCAACTTAACAGACTGCATTCTATTCTAAAGCCTTTCATGCTGCGGCGAGTTAAAAAAGATGTAGTATCTGAACTGACTAAGAAAATAGAGGTTACAGTGCACTGCAAGTTGAGTTCTCGGCAGCAAGCTTTCTATCAAGCAATCAAGAATAAAATATCTCTTGCTGAGTTGTTTGATAGTAATCGTGGGCAGCTCAACGATAAGAGAATTCTGAATTTAATGAATATTGTTATTCAACTAAGAAAGGTTTGCAACCATCCAGAGTTGTTTGAGAGGAGTGAGGGAACCACATTCTATAATTTTGCAGAGATTCCAAATTCCCTTCTGCCTCCTCCATTTGGGGAGTTGGAGGATGTATACTATTCTGGGGGTCACAATCCAATATCATACAAGATGCCAAAACTTGTCCATCAAGAAATCATGCGAGGTTCTAAATTGTTCAATTCAACAATTGCTCGTGGTGTTAGCAGAGAACTTTTTTGTAGATATTTTAATATTTATAGCCCAGAGAATGTTTTTCAATCTATCTTCTCTGAAGTGAATAAATCAAATGCGTCATTTATTAAAAGTGGAACTTTTGGCTTTACCCATTTGATGGATTTGTCCCCGCAAGAAGTGATGTTTTCAGCTACTGGTTCTTTTATGGAGCAAGTACTGTATTCTATGGTGAGATGGGAACAGAAATTTATCAATGAAGTTGTGGACTTCGTAACGGAGACTATAGATAATGATCCTGAATACAGTTACCTTGAAAGAGGAAAAGTGAGGGCTGTCACACGAATGTTATTGGTGCCTACAAAATCTGAGACAAAACTTTTTCAAAGAAGATTTGCTACTGGCCCCAGCCATGCCCCTTTTGAGGCATTAGTTGTCCCATATCAAGATAGGATTATATCCAATGCAAGACTTATTCACTCAGCATTCACATATATCCCTCGGACTAGAGCTCCCCCAATTGTTGCCCACTGCTCAGACCGAAGCTTCTCTTATAAAACACTGGAAGAGTTGCATGACCCTTGGGTTAAGAGGTTGCTTGTGGGATTTGCACGTACATCTGAGTTTAATGGACCTAGAAAGCCAGATGGTCCTCCCCATCATTTAATTCAAGAGATTGATTCTGACCTAGAAAGCCAGCCTGCTCTTCAGTTAACCTACAAAATTTTCGGTTCATCTCCCCCTATGCAAAATTTTGACCCAGCGAAATTGCTCACTGACTCTGGGAAGCTTCAAACGCTTGACATATTATTAAAACGTTTGCGGGCTGAAAATCATCGTGTTCTCTTGTTTGCTCAGATGACTAAGATGCTGAATATTCTTGAGGACTACATGAACTATAGAAAATATAGATATTTTAGGCTTGATGGATCATCATCTATTCAGGACCGCAGAGACATGGTTAGAGACTTCCAGCAGAGGAATGATGTTTTTGTGTTCTTACTTAGTACAAGAGCCGGTGGATTGGGTATTAACTTGACGGCTGCTGACACAGTAATCTTTTATGAGAATGATTGGAATCCCACATTGGATCAGCAGGCAATGGATAGAGCTCATAGATTGGGTCAAACAAGAGATGTCACTGTTTACAGACTTATATGTAAAGAGACAGTTGAAGAGAAGATACTTCTTAGAGCAAGTCAAAAAAGCACTGTACAAAACCTCGTCATGACTGGTGGTTCTACTGATGATATTTTAGCTCCTGAGGATGTTGTATCTTTGCTTCTGGATGATGTGCAGTTGGAGCAGAAATTCAAGGAAATTCCTCTTCAGGCAAAGGATAAGCAAAAGAGGAAACAAACTGTGAAGGGTATACGGGTAAATGAAGACGGTGATGCGTCTCTGGAAGATCTAACAGACTCTGGAGCACAGGGCCCAGATAATGATATTTCTCTTGACCCAGAGGGATCAAAGCCCAGTAATAAAAAGAGAAAAGCTGCCTCTGAGAAGCAAACGGCATCAAGGGCAGGGAATTTTCAAAAGACGAATGAGTTGAATAGTGCAACGGCGATGAACTATGAGTTGTATGATGCTACTCAAAATACTGATCCAGCGGTCCAGAAACCCAAGCGACCAAAGAAGGCAAAGAAGGTTGGGAATGATAAGTTTAACGACTCTTTTACTGGTACAGTAAATATATTCCCAGAGCAGACCCAATAG | 4554 | 0.4135 | MDHKRQFKDSLSYSSLFNLEPLMNFQLPQEDDDFDYNGNSSQDESRDSQGGAIANHINGSMRGREVNLLKKRKWSQNSDDEDKGNFCGTHMTEERYRSMLGEHVQKYKRRYKDTSSSPAQNRGQLLKSNTGLKARKLANEHRGGTHALETTLEWPNDINPHKPVIYRDAEFRQQYGPDRTIYEPASLDIGDGVTYKIPPPYDKLAAMLNLPSFSDIRVEEFYLKGTLDLGSLAAMMASDKKGGTRNRAAMGETLPQYDSLQARLKAMSASNSPHQFSLKVSDIGLNSSIPEGAAGNIKRTILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKQKVNKDPSLIEKEEMERIGKIWVNIVRRDIPKHHRFFTGFHRKQLVDAKRFSENCQREVRMKMSRSLKFMKSAPIRTRKLARDVLLFWKRADKEMAELRKKEEKEVAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNLLSSDALPTVDEKADDQDAELGSSDAGPSGEEDPEEAELKKEAMKAAQEAVSKQRKLTSAFDSECLRLRQAGETDALSQEVAGASNIDLQTPSTMPVASTVRTPEMFRGTLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWNEELERFCPEMKALPYWGGLHERTVLRKSINPKDLYRRDAKFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSANSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVVSELTKKIEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQLNDKRILNLMNIVIQLRKVCNHPELFERSEGTTFYNFAEIPNSLLPPPFGELEDVYYSGGHNPISYKMPKLVHQEIMRGSKLFNSTIARGVSRELFCRYFNIYSPENVFQSIFSEVNKSNASFIKSGTFGFTHLMDLSPQEVMFSATGSFMEQVLYSMVRWEQKFINEVVDFVTETIDNDPEYSYLERGKVRAVTRMLLVPTKSETKLFQRRFATGPSHAPFEALVVPYQDRIISNARLIHSAFTYIPRTRAPPIVAHCSDRSFSYKTLEELHDPWVKRLLVGFARTSEFNGPRKPDGPPHHLIQEIDSDLESQPALQLTYKIFGSSPPMQNFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYFRLDGSSSIQDRRDMVRDFQQRNDVFVFLLSTRAGGLGINLTAADTVIFYENDWNPTLDQQAMDRAHRLGQTRDVTVYRLICKETVEEKILLRASQKSTVQNLVMTGGSTDDILAPEDVVSLLLDDVQLEQKFKEIPLQAKDKQKRKQTVKGIRVNEDGDASLEDLTDSGAQGPDNDISLDPEGSKPSNKKRKAASEKQTASRAGNFQKTNELNSATAMNYELYDATQNTDPAVQKPKRPKKAKKVGNDKFNDSFTGTVNIFPEQTQ | 1517 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele07g0886 | 1517 | Coils | Coil | 513 | 533 | - | - | |
Lele07g0886 | 1517 | FunFam | DNA helicase INO80-like protein | 1179 | 1429 | - | - | |
Lele07g0886 | 1517 | FunFam | Putative DNA helicase INO80 | 560 | 838 | - | - | |
Lele07g0886 | 1517 | MobiDBLite | consensus disorder prediction | 1391 | 1517 | - | - | |
Lele07g0886 | 1517 | SMART | ultradead3 | 584 | 779 | IPR014001 | - | |
Lele07g0886 | 1517 | MobiDBLite | consensus disorder prediction | 489 | 517 | - | - | |
Lele07g0886 | 1517 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 600 | 771 | IPR014001 | - | |
Lele07g0886 | 1517 | MobiDBLite | consensus disorder prediction | 28 | 61 | - | - | |
Lele07g0886 | 1517 | MobiDBLite | consensus disorder prediction | 41 | 55 | - | - | |
Lele07g0886 | 1517 | Coils | Coil | 425 | 464 | - | - | |
Lele07g0886 | 1517 | Pfam | Helicase conserved C-terminal domain | 1211 | 1320 | IPR001650 | - | |
Lele07g0886 | 1517 | MobiDBLite | consensus disorder prediction | 1501 | 1517 | - | - | |
Lele07g0886 | 1517 | Gene3D | - | 826 | 897 | IPR027417 | - | |
Lele07g0886 | 1517 | ProSiteProfiles | DBINO domain profile. | 353 | 478 | IPR020838 | GO:0003677 | |
Lele07g0886 | 1517 | CDD | SF2_C_SNF | 1199 | 1331 | - | - | |
Lele07g0886 | 1517 | Pfam | DNA-binding domain | 348 | 477 | IPR020838 | GO:0003677 | |
Lele07g0886 | 1517 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 818 | 1360 | IPR027417 | - | |
Lele07g0886 | 1517 | Pfam | SNF2-related domain | 603 | 890 | IPR000330 | GO:0005524|GO:0140658 | |
Lele07g0886 | 1517 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 572 | 816 | IPR027417 | - | |
Lele07g0886 | 1517 | MobiDBLite | consensus disorder prediction | 1391 | 1411 | - | - | |
Lele07g0886 | 1517 | Gene3D | - | 584 | 825 | IPR038718 | - | |
Lele07g0886 | 1517 | MobiDBLite | consensus disorder prediction | 1434 | 1448 | - | - | |
Lele07g0886 | 1517 | Gene3D | - | 1177 | 1418 | IPR027417 | - | |
Lele07g0886 | 1517 | PANTHER | HELICASE SRCAP-RELATED | 92 | 528 | - | - | |
Lele07g0886 | 1517 | SMART | helicmild6 | 1237 | 1320 | IPR001650 | - | |
Lele07g0886 | 1517 | MobiDBLite | consensus disorder prediction | 1449 | 1484 | - | - | |
Lele07g0886 | 1517 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1211 | 1364 | IPR001650 | - | |
Lele07g0886 | 1517 | MobiDBLite | consensus disorder prediction | 110 | 131 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele07g0886 | Lele-ChrLele07 | 5219872 | 5229834 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele07g0886 | 609 | 890 | RAD5 or RAD16-like Gene Family | AT5G43530 | 29.052 | 5.48e-26 | 114 |