Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0880 ATGAGAACTTCAATGCTCTGTTTCAGACCTATAATATTCTTTTCGATATCTGTAAGGGATACAAAAGATACAGATAATATACGAAATATGCTGATCTTGGCCCCCTCCAACCGTAAACTTAAGGAACAAGTGCCATGCATCCTGACCAAAAGCGCTCCAAGTTTTGGTTCCTTAAAATTCACAAGTTCTTGGCTTCTTGCATTCTCGCATTTTGAGCATATTGGTGTTCCTCTAAGTGATAACATAGCCAATAATAGGAAGCTCATTTGGAATTTACCAGAAAAATCTATCATGGATGGATTTGAGTGGAAGTGGTGGTTCGGATGGGTGAAAAGGCTCTTCACTCCTGAGTCAAAGGCCAAAAAGCCAAAGAAATGGGGATGGAGTCTTGGAAGGTTTAAGCTGAAACAATGTCCAACACTTACAGCAACAAATAGAGAACTTACTAAAGCAAGTGAAGAGCAGAGAAAGCATGCTTTGTCTGTGGCTATTGCAACAGCAGCTGCTGCAGAAGCTGCTGTTGCTGCAGCTCATGCTGCTGCTGAGGTTGTCCGGCTAACCGGTTCATCCCGATCCTATTCTTATCTATCCAAAGGCAATCGGAACTTGGCTGCCTCTAAAATTCAAAGCGCATACCGTGGACATCTTGCAAAGAAAGCACTGGGAGCATTGAAGGGAGTTGTGAGACTTCAAGCTATAATTCGTGGTCAAGCTGTGAGACGTCAAGTGTTCAGCACTTTGAAGCATTTGCTTTCCAGTGAAAGAGAGCTGGAGAAATTCCATCCTGAATGCCATGGTCAAAGGACTTGGGATTGCAGTTTGCATTCAAAAGAAGACATAGAAGCCATATGGTTGAGAAGACAAGAGGCCACTATCAAAAGAGAACGCATGAAACAGTATTCCTTCTCACACAGGATGATAGTTCTATGCCAAATTCTCCGGTTTTCCCCACTTATGGCTGTGACGGAATCTGCTAAGCCAAAGGCAAGATCTATAAGCACACCAAGGCAAAGAACAGAGTTTCTGGAACTATGCCTCAATCAAAGTGAGCCTCATAAGGAAGGCATATCGTTTTGGTCTCCTCCTTATGGTGCGCTTGCCAGCACCAATAGAATGCAGAGACGTCAGAGTGCATATCCCCATCATTATCGTTAG 1155 0.4346 MRTSMLCFRPIIFFSISVRDTKDTDNIRNMLILAPSNRKLKEQVPCILTKSAPSFGSLKFTSSWLLAFSHFEHIGVPLSDNIANNRKLIWNLPEKSIMDGFEWKWWFGWVKRLFTPESKAKKPKKWGWSLGRFKLKQCPTLTATNRELTKASEEQRKHALSVAIATAAAAEAAVAAAHAAAEVVRLTGSSRSYSYLSKGNRNLAASKIQSAYRGHLAKKALGALKGVVRLQAIIRGQAVRRQVFSTLKHLLSSERELEKFHPECHGQRTWDCSLHSKEDIEAIWLRRQEATIKRERMKQYSFSHRMIVLCQILRFSPLMAVTESAKPKARSISTPRQRTEFLELCLNQSEPHKEGISFWSPPYGALASTNRMQRRQSAYPHHYR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0880 384 Pfam IQ calmodulin-binding motif 204 220 IPR000048 GO:0005515
Lele07g0880 384 Gene3D - 199 250 - -
Lele07g0880 384 PANTHER IQ-DOMAIN 5-RELATED 109 305 - -
Lele07g0880 384 ProSiteProfiles IQ motif profile. 201 229 IPR000048 GO:0005515
Lele07g0880 384 ProSiteProfiles IQ motif profile. 225 252 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0880 Lele-ChrLele07 5185970 5188717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0880 315 360 IQD Protein Family AT5G03960 43.478 4.10e-06 46.6