Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0855 ATGGGAATGGCCTGCGAGTCCCACTTTCACGTGTTGGCTGTCGACGACAGCATAATCGATCGAAAGCTTATTGAGAGGCTCCTCAAAACCTCCTCCTATCAAGTTACCACCGTTGATTCCGGTAGCAAGGCTTTAGAGTTTCTGGGTTTGCGTGGCAATGATCAGACCGACCCTAATACACCTTCCGTGTCTCCTCGCAGTAATCAGGAAGTGGAAGTGAACCTTGTTATTACAGACTACTGTATGCCCGGCATGACTGGCTATGACTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCCGTGGTGATCATGTCATCCGAAAATGTGCCTTCGAGGATTAGCAAATGCTTAGAAGAAGGAGCAGAGGAATTTTTCTTGAAACCAGTGAAGCCAGCAGATCTCAATAGGCTTAGACCCTATATGATGAAGACCCAGAAATTGAAGTATCAAGCACAAAAAAGAGATGAAAAGCTTGAAACCCCAGAGATTGAACTAGCACCACAATCACTGGTAGAACAACATCATCAACATTCACTGCAGATAGTCAATACTAACAAGAGGAAAACCGTGGAAGAGGGGCATTCGCTTGAAACTGATAGAACAAGAACAAGATTCAATGGCATAGCCACTATGGTCTGA 651 0.4424 MGMACESHFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRGNDQTDPNTPSVSPRSNQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISKCLEEGAEEFFLKPVKPADLNRLRPYMMKTQKLKYQAQKRDEKLETPEIELAPQSLVEQHHQHSLQIVNTNKRKTVEEGHSLETDRTRTRFNGIATMV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0855 216 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Lele07g0855 216 CDD REC_typeA_ARR 11 141 - -
Lele07g0855 216 Gene3D - 10 210 - -
Lele07g0855 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 190 IPR045279 GO:0009736
Lele07g0855 216 SUPERFAMILY CheY-like 9 154 IPR011006 -
Lele07g0855 216 SMART REC_2 9 142 IPR001789 GO:0000160
Lele07g0855 216 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0855 Lele-ChrLele07 4950788 4952056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0855 1 216 Response Regulator Gene Family AT3G57040 61.983 5.05e-92 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele07g0855 Response_reg 3.3e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0855 07 4950788 4952056 Lele07g0855 07 4950788 4952056 ECH
Lele05g0817 05 4892637 4893916 Lele07g0855 07 4950788 4952056 hybridization
Lele06g0667 06 3993793 3995123 Lele07g0855 07 4950788 4952056 hybridization