Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0845 ATGTCTTCGGAGGACTCTCTAAGATCTCTATCCATGGACTATCTCAACCTGCTCATCAATGGTCAAGCCTTCAGCGACGTCACTTTCAGCGTGGAGGGTCGTCTGGTCCACGCGCATCGCTGCATCCTGGCGGCTCGAAGCCTCTTCTTCAGGAAATTCTTCTGCGGCTCATCAGACACACCGTCCGGGCTGGACCCTGCGTCAGGCTCTCGGGTCAACTCAGCCACGTCTCCATCGAGACCCGGGGTTATCTCGGTGGACTCGGTGGGCTATGAAGTGTTTCTGCTTCTGCTTCAGTTCTTGTACAGTGGCCAAGTCTCTATTGTGCCTCAGAAGCACGAGCCGAGGCCTAATTGCGGCGAAAGGGGTTGCTGGCATACGCATTGCACCTCCGCCGTTGATCTCGCCCTTCATACTCTCGCCGCCGCTAGATCTTTTGGCGTCGAGCAGCTCGCATTGCTCACTCAGAAACAATTATCCAGCATGGTAGAGAAGGCCTCCATTGAAGATGTGATGAAGGTGCTTCTCGCTTCAAGAAAGCAAGACATGCACCAACTTTGGAGTACTTGTTCACACCTCGTTGCCAAGTCCGGTCTCCCTCCTGAAGTCCTCGCCAAACACCTTCCCATCGATGTTGTCGCTAAAATCGAAGAGCTTCGTCTCAAAACCTCCCTCGTTCGTCGCTCCCTACTCCCCCACGACCATATCAGCACCACCGCAGATCTCGAGGACCAGAAAATCCGCAGAATGAGAAGGGCACTCGACTCTTCCGATGTTGAACTCGTCAAGCTCATGGTCATGGGAGAAGGCTTAAATCTAGACGAAGCATTGGCCTTACACTTCGCCGTAGAGAATTGCAGCCGTGAAGTCGTTAAGGCCTTGCTGGAGCTCGGTGCAGCCGATGTCAACTACCCCGTCGGACCCGCCGGCAAGACCCCACTTCACCTTGCCGCCGAGATGGTGTCACCGGACATGGTGGCGGTCCTCCTCGACCACCACGCCGACCCGAACGTACGAACCGTGGATGGAGTAACCCCTCTTGACATCCTGAGAACCCTAACTTCCGATTTTCTGTTCAAAGGAGCCGTCCCTGGGCTCGGCCATATTGAACCAAACAAACTGAGGTTGTGTTTGGAGCTGGTTCAGTCGGCAGCTCTTGTGCTGTCACGCGAAGAAGGGGATGCGAATCCTCCTTCTTCAATGACCATTTATCCGCCAATGAACGAAGACCATAACATCAGTAGTAGCAACAGCAATATCGGGAACCTTAATCTGGACGCAAGGCTGGTTTACCTGAATCTGGGTGCGACGTCTTCGTCGGGACAAATGGGTTAG 1335 0.5416 MSSEDSLRSLSMDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGSSDTPSGLDPASGSRVNSATSPSRPGVISVDSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALHTLAAARSFGVEQLALLTQKQLSSMVEKASIEDVMKVLLASRKQDMHQLWSTCSHLVAKSGLPPEVLAKHLPIDVVAKIEELRLKTSLVRRSLLPHDHISTTADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHFAVENCSREVVKALLELGAADVNYPVGPAGKTPLHLAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLGHIEPNKLRLCLELVQSAALVLSREEGDANPPSSMTIYPPMNEDHNISSSNSNIGNLNLDARLVYLNLGATSSSGQMG 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0845 444 ProSiteProfiles Ankyrin repeat region circular profile. 309 339 - -
Lele07g0845 444 CDD BTB_POZ_NPR_plant 8 163 - -
Lele07g0845 444 Pfam BTB/POZ domain 16 111 IPR000210 GO:0005515
Lele07g0845 444 FunFam regulatory protein NPR5 isoform X2 240 357 - -
Lele07g0845 444 SUPERFAMILY POZ domain 9 161 IPR011333 -
Lele07g0845 444 ProSiteProfiles BTB domain profile. 25 110 IPR000210 GO:0005515
Lele07g0845 444 Pfam Domain of unknown function (DUF3420) 198 251 IPR024228 -
Lele07g0845 444 ProSiteProfiles Ankyrin repeat profile. 309 341 IPR002110 GO:0005515
Lele07g0845 444 MobiDBLite consensus disorder prediction 61 80 - -
Lele07g0845 444 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 439 IPR044284 GO:0099402
Lele07g0845 444 Gene3D - 241 357 IPR036770 -
Lele07g0845 444 SMART BTB_4 25 163 IPR000210 GO:0005515
Lele07g0845 444 FunFam regulatory protein NPR5 isoform X1 4 196 - -
Lele07g0845 444 SMART ANK_2a 309 338 IPR002110 GO:0005515
Lele07g0845 444 SMART ANK_2a 274 304 IPR002110 GO:0005515
Lele07g0845 444 Gene3D Potassium Channel Kv1.1; Chain A 3 196 IPR011333 -
Lele07g0845 444 SUPERFAMILY Ankyrin repeat 268 352 IPR036770 -
Lele07g0845 444 Pfam Ankyrin repeats (3 copies) 257 339 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0845 Lele-ChrLele07 4894534 4896663 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele07g0845 BTB 1.1e-14 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0845 07 4894534 4896663 Lele07g0845 07 4894534 4896663 ECH
Lele05g0805 05 4832373 4834670 Lele07g0845 07 4894534 4896663 hybridization
Lele06g0655 06 3928379 3930668 Lele07g0845 07 4894534 4896663 hybridization