Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele07g0845 | ATGTCTTCGGAGGACTCTCTAAGATCTCTATCCATGGACTATCTCAACCTGCTCATCAATGGTCAAGCCTTCAGCGACGTCACTTTCAGCGTGGAGGGTCGTCTGGTCCACGCGCATCGCTGCATCCTGGCGGCTCGAAGCCTCTTCTTCAGGAAATTCTTCTGCGGCTCATCAGACACACCGTCCGGGCTGGACCCTGCGTCAGGCTCTCGGGTCAACTCAGCCACGTCTCCATCGAGACCCGGGGTTATCTCGGTGGACTCGGTGGGCTATGAAGTGTTTCTGCTTCTGCTTCAGTTCTTGTACAGTGGCCAAGTCTCTATTGTGCCTCAGAAGCACGAGCCGAGGCCTAATTGCGGCGAAAGGGGTTGCTGGCATACGCATTGCACCTCCGCCGTTGATCTCGCCCTTCATACTCTCGCCGCCGCTAGATCTTTTGGCGTCGAGCAGCTCGCATTGCTCACTCAGAAACAATTATCCAGCATGGTAGAGAAGGCCTCCATTGAAGATGTGATGAAGGTGCTTCTCGCTTCAAGAAAGCAAGACATGCACCAACTTTGGAGTACTTGTTCACACCTCGTTGCCAAGTCCGGTCTCCCTCCTGAAGTCCTCGCCAAACACCTTCCCATCGATGTTGTCGCTAAAATCGAAGAGCTTCGTCTCAAAACCTCCCTCGTTCGTCGCTCCCTACTCCCCCACGACCATATCAGCACCACCGCAGATCTCGAGGACCAGAAAATCCGCAGAATGAGAAGGGCACTCGACTCTTCCGATGTTGAACTCGTCAAGCTCATGGTCATGGGAGAAGGCTTAAATCTAGACGAAGCATTGGCCTTACACTTCGCCGTAGAGAATTGCAGCCGTGAAGTCGTTAAGGCCTTGCTGGAGCTCGGTGCAGCCGATGTCAACTACCCCGTCGGACCCGCCGGCAAGACCCCACTTCACCTTGCCGCCGAGATGGTGTCACCGGACATGGTGGCGGTCCTCCTCGACCACCACGCCGACCCGAACGTACGAACCGTGGATGGAGTAACCCCTCTTGACATCCTGAGAACCCTAACTTCCGATTTTCTGTTCAAAGGAGCCGTCCCTGGGCTCGGCCATATTGAACCAAACAAACTGAGGTTGTGTTTGGAGCTGGTTCAGTCGGCAGCTCTTGTGCTGTCACGCGAAGAAGGGGATGCGAATCCTCCTTCTTCAATGACCATTTATCCGCCAATGAACGAAGACCATAACATCAGTAGTAGCAACAGCAATATCGGGAACCTTAATCTGGACGCAAGGCTGGTTTACCTGAATCTGGGTGCGACGTCTTCGTCGGGACAAATGGGTTAG | 1335 | 0.5416 | MSSEDSLRSLSMDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGSSDTPSGLDPASGSRVNSATSPSRPGVISVDSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALHTLAAARSFGVEQLALLTQKQLSSMVEKASIEDVMKVLLASRKQDMHQLWSTCSHLVAKSGLPPEVLAKHLPIDVVAKIEELRLKTSLVRRSLLPHDHISTTADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHFAVENCSREVVKALLELGAADVNYPVGPAGKTPLHLAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLGHIEPNKLRLCLELVQSAALVLSREEGDANPPSSMTIYPPMNEDHNISSSNSNIGNLNLDARLVYLNLGATSSSGQMG | 444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele07g0845 | 444 | ProSiteProfiles | Ankyrin repeat region circular profile. | 309 | 339 | - | - | |
Lele07g0845 | 444 | CDD | BTB_POZ_NPR_plant | 8 | 163 | - | - | |
Lele07g0845 | 444 | Pfam | BTB/POZ domain | 16 | 111 | IPR000210 | GO:0005515 | |
Lele07g0845 | 444 | FunFam | regulatory protein NPR5 isoform X2 | 240 | 357 | - | - | |
Lele07g0845 | 444 | SUPERFAMILY | POZ domain | 9 | 161 | IPR011333 | - | |
Lele07g0845 | 444 | ProSiteProfiles | BTB domain profile. | 25 | 110 | IPR000210 | GO:0005515 | |
Lele07g0845 | 444 | Pfam | Domain of unknown function (DUF3420) | 198 | 251 | IPR024228 | - | |
Lele07g0845 | 444 | ProSiteProfiles | Ankyrin repeat profile. | 309 | 341 | IPR002110 | GO:0005515 | |
Lele07g0845 | 444 | MobiDBLite | consensus disorder prediction | 61 | 80 | - | - | |
Lele07g0845 | 444 | PANTHER | BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 | 1 | 439 | IPR044284 | GO:0099402 | |
Lele07g0845 | 444 | Gene3D | - | 241 | 357 | IPR036770 | - | |
Lele07g0845 | 444 | SMART | BTB_4 | 25 | 163 | IPR000210 | GO:0005515 | |
Lele07g0845 | 444 | FunFam | regulatory protein NPR5 isoform X1 | 4 | 196 | - | - | |
Lele07g0845 | 444 | SMART | ANK_2a | 309 | 338 | IPR002110 | GO:0005515 | |
Lele07g0845 | 444 | SMART | ANK_2a | 274 | 304 | IPR002110 | GO:0005515 | |
Lele07g0845 | 444 | Gene3D | Potassium Channel Kv1.1; Chain A | 3 | 196 | IPR011333 | - | |
Lele07g0845 | 444 | SUPERFAMILY | Ankyrin repeat | 268 | 352 | IPR036770 | - | |
Lele07g0845 | 444 | Pfam | Ankyrin repeats (3 copies) | 257 | 339 | IPR002110 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele07g0845 | Lele-ChrLele07 | 4894534 | 4896663 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Lele07g0845 | BTB | 1.1e-14 | CL0033 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele07g0845 | 07 | 4894534 | 4896663 | Lele07g0845 | 07 | 4894534 | 4896663 | ECH | |
Lele05g0805 | 05 | 4832373 | 4834670 | Lele07g0845 | 07 | 4894534 | 4896663 | hybridization | |
Lele06g0655 | 06 | 3928379 | 3930668 | Lele07g0845 | 07 | 4894534 | 4896663 | hybridization |