Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0842 ATGGCGATGCCACGTAGCTTCCATAAGCACACACATCCACCAACAGAATCAGAAAGATACAATCCTACTTTGTGGATTCTATTTCGTTGTTGTTGCTCACTGGAATTATTGTATTTTCAGAATGGTCATGCTGGGTTCATGCTCTCGTGTTATGATGCTCAACTTTGCTATGATTCTGGAACTGACACCTTTCAGGCAAGGTACTCTCCTCATGGGCGATGGGCAGTTGAGGAAAATATACCATGGCAAAGACTGAGAATCCCACCTATTGACATTTCTCCTCATGTTCTTTGTCCCTCTGACTGTTTATCTGACTTGAGACCTGGAGATCATTTTGAGATTCAGTGGAGAAGAAACAGAGAATTTCCTTATGGTTGGTGGTATGGTGTTGTTGGTCACTTGAACTCATGTGAGCAGGGGAATCACAGCCGCTGTCACCTTAATGCTAATGCTCCCATCACAAGAACTTTCATTATCGCCTCAGCCCTTTTTACTATCTTCTTCGGGATCCAAGGTCGTTATAACAGACTGGGACTGTCTTATCAGGACATATTTGGAAAGCTTCGCCTCTGGAAATTGATTGTGTCCATATTTGCTTTTTCATCAACTCCAGAGTTGATGTTTGGACTGTTTCTGCTATACTATTTCAGGGTCTTCGAGAGACAGATAGGCTCCAATAAATACTCAGTCTTTATCACATTCTCCATATTAATATCACTGCTGTTTGAGGTGCTTTCTATATCAATCTTAAAAGATCCTGCAGCAATCTTAGTCACCCCTGGACCTTATGGTCTTATATTTGCTTCATTCGTACCCTTTTTCTTTGACATTCCAGTTTCAACACGGTTTCGTGTAGCTGGTTTCCACTTCTCTGATAAATCATTCATGTATCTAGCTGGTCTACAGCTTCTTTTATCATCATGGAAAAGTTCTCTCTTGCCAGGGATGTGTGGCATCCTTGCTGGTTCCTTGTACCGTTTAAATGTCTTCTACATACGCAAAGCCAAGTTCCCAGAGTTTATTGCCTCCTTCTTTTCAAGGATTTCTTTGCCATCCATCGTAAGTCCACCTTCAGCATCAACAAGGAATGTAGTGGGAAATATGCCATCCTATCCAACTCGCCAGATGGAGGGGAACTATCCTGCTCCAGTGCAATCTGTGCCACAACCATCGGAGGACTCTATCTCTACACTTGTCTCCATGGGCTTTGATAGTGATTCTGCTAGACAGGCACTATTGCAAGCCAGGAACGATGTTAATGTGGCTACAAACATCCTGCTGGAGGCACAATCCCACCAATAA 1302 0.4293 MAMPRSFHKHTHPPTESERYNPTLWILFRCCCSLELLYFQNGHAGFMLSCYDAQLCYDSGTDTFQARYSPHGRWAVEENIPWQRLRIPPIDISPHVLCPSDCLSDLRPGDHFEIQWRRNREFPYGWWYGVVGHLNSCEQGNHSRCHLNANAPITRTFIIASALFTIFFGIQGRYNRLGLSYQDIFGKLRLWKLIVSIFAFSSTPELMFGLFLLYYFRVFERQIGSNKYSVFITFSILISLLFEVLSISILKDPAAILVTPGPYGLIFASFVPFFFDIPVSTRFRVAGFHFSDKSFMYLAGLQLLLSSWKSSLLPGMCGILAGSLYRLNVFYIRKAKFPEFIASFFSRISLPSIVSPPSASTRNVVGNMPSYPTRQMEGNYPAPVQSVPQPSEDSISTLVSMGFDSDSARQALLQARNDVNVATNILLEAQSHQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0842 433 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 389 429 IPR015940 -
Lele07g0842 433 Gene3D - 149 328 IPR035952 -
Lele07g0842 433 SUPERFAMILY UBA-like 383 429 IPR009060 GO:0005515
Lele07g0842 433 Pfam UBA/TS-N domain 391 426 IPR015940 -
Lele07g0842 433 SMART uba_6 391 428 IPR015940 -
Lele07g0842 433 SUPERFAMILY Rhomboid-like 150 326 IPR035952 -
Lele07g0842 433 Gene3D - 358 432 - -
Lele07g0842 433 PANTHER ESTS AU081301(E20138) 40 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0842 Lele-ChrLele07 4845050 4851198 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1416 13 23777993 23781444 Lele07g0842 07 4845050 4851198 CCT
Lele14g1327 14 22125326 22128205 Lele07g0842 07 4845050 4851198 CCT
Lele15g1020 15 5950022 5953462 Lele07g0842 07 4845050 4851198 CCT
Lele16g1051 16 5927735 5931199 Lele07g0842 07 4845050 4851198 CCT
Lele07g0842 07 4845050 4851198 Lele07g0842 07 4845050 4851198 ECH