Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0840 ATGCATCACAGTGAAGGAGATGTGGACGCTATCTATTATTCTATTGAAGTTGTTCGCTTGCCTTCTTATGAAGTCTTGATCATCCTCAACTCCCAAACAAGCTTCCACTCACTTTTCCCTGTGACCCTGTCAAGGCGTTACCTTTATCAGCAGAGGACTAGAATTGGAATTACCAAGGAGCGCATAAAGGGCCCACATCCCAACGCAAAAGGGAGAAGCCATAGGCCCAGGCGGCACGTGCCCACGCGGTCCATTGCAGTTTCTTATAAGTGCGTAGCGCTATTTAAACGCCAGGCAGCGAAAGACGACGACGGAAAGTTGTGGGAGACGGTGTTGGAAACCCCTGTGGCCATGCCTTACCTTGTCCGAGAGAAATTGTTTATTGGTGATATCAGTGACGCTGCGGAGATCCTTCAAAATGGTAGCGATGAAATCACGAATATTTTATCGGTTCTTAGCTCTGCTTCAATATCATTCTTTTCCGAATGGCGAAGTAGCCTAACCATCCCTGCTAAGGAAATTAAGGAGGTATATGTGGGTGGTGGTCATGGTGGTGCCCCTGATGATAACCTGGGTGATATATCAAGGAGTCCGTTGTCACGGGAGAACCTTTTGTACTCGTTGGAATATGCAGGCAAGGATTTGAAGTTGGTTAGGATGGCTGTCCCTCTGAGGGATACAGAAAATGAAAATTTGTTGGATTACTTGGATGTTTGCCTCAATTTTATTGATCGAGGTAGGAAAGATGGTTCTGTTTTGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCGATCATTACAGCATATCTGATGAGATCTGAACATCTATCTCAAGAAGATGCCCTTCAATCATTAAGGAAGAGCTGTGAATTTGTTTGCCCCAACGATGGTTTTCTAGAACAGTTAAAAATGTTTGAGGAGATGGGCTTTGAGGTAGATCGCTCTAGCTCTATATACAGGCGCTTTCGTTTGAGAATACTAGGTGAGAAGTATAACTCGGGGGAGAGAATAGACAGTTCTAAACTTGGAGCTGATCCTGGAATGCCTGTTAGTGTTGCTTCAGAAGTAGAAGGAGCTTCAAATGCAGGAAATAATCGCAGTCCTACGTATCGCTGTAAGAAGTGCCGGCGTGTAGTTGCATTGAAGGAACATGTTGTAGACCACGTGCCAGGTGAAGGCGAGACATCCAGCCAGTGGCAGAAGTGGAGAAGTGACAGCCTCTTTAACAAATGCAATGAATTTGAGTGTTCTTCCATATTTATTGAGCCACTACAATGGATGAAAGCAGTTGAGGAAGGTGCATCGGAGGGGAAGTTGAGCTGTGCGCATTGTGATGCCCGCTTGGGAAACTTCAATTGGTTTGGCATCCAATGCAGCTGCGGAAGCTGGATAACCCCGGCCTTTCAGATCCACAAGTGCCGAGTGGACGCTAGCCCTATCTAA 1446 0.4613 MHHSEGDVDAIYYSIEVVRLPSYEVLIILNSQTSFHSLFPVTLSRRYLYQQRTRIGITKERIKGPHPNAKGRSHRPRRHVPTRSIAVSYKCVALFKRQAAKDDDGKLWETVLETPVAMPYLVREKLFIGDISDAAEILQNGSDEITNILSVLSSASISFFSEWRSSLTIPAKEIKEVYVGGGHGGAPDDNLGDISRSPLSRENLLYSLEYAGKDLKLVRMAVPLRDTENENLLDYLDVCLNFIDRGRKDGSVLVHCFAGVSRSAAIITAYLMRSEHLSQEDALQSLRKSCEFVCPNDGFLEQLKMFEEMGFEVDRSSSIYRRFRLRILGEKYNSGERIDSSKLGADPGMPVSVASEVEGASNAGNNRSPTYRCKKCRRVVALKEHVVDHVPGEGETSSQWQKWRSDSLFNKCNEFECSSIFIEPLQWMKAVEEGASEGKLSCAHCDARLGNFNWFGIQCSCGSWITPAFQIHKCRVDASPI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0840 481 FunFam Dual specificity protein phosphatase 12-like 121 329 - -
Lele07g0840 481 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 118 478 - -
Lele07g0840 481 SMART dsp_5 118 309 IPR020422 GO:0006470|GO:0008138
Lele07g0840 481 CDD DSP_DUSP12 121 314 - -
Lele07g0840 481 Pfam Dual specificity phosphatase, catalytic domain 216 308 IPR000340 GO:0008138|GO:0016311
Lele07g0840 481 Gene3D Protein tyrosine phosphatase superfamily 121 329 IPR029021 -
Lele07g0840 481 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 230 288 IPR000387 GO:0016311|GO:0016791
Lele07g0840 481 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 215 309 IPR029021 -
Lele07g0840 481 ProSiteProfiles Dual specificity protein phosphatase domain profile. 118 312 IPR020422 GO:0006470|GO:0008138
Lele07g0840 481 ProSitePatterns Tyrosine specific protein phosphatases active site. 254 264 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0840 Lele-ChrLele07 4830596 4836291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0840 217 308 Protein tyrosine phosphatase (PTP) family AT3G06110 37.634 8.18e-15 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0840 07 4830596 4836291 Lele07g0840 07 4830596 4836291 ECH
Lele05g0800 05 4772605 4778629 Lele07g0840 07 4830596 4836291 hybridization
Lele06g0648 06 3869654 3872118 Lele07g0840 07 4830596 4836291 hybridization