Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0837 ATGATTCTACACCGTACCGTGCAGGAGAAGAGAAAGAAATCGCAATTTGAAGATGATGATGATGATGGAGAAGAAGGCAATGGTTGCTTAAGCATTCTCATCCTGGTCATTGCTTTGGGTACGTCTGTATGCTTTATAGGTTTAGTCAGACCAGGCTTGTTCATTGGTCTAGGACAGTGGAGGGAGCATTTCTGTGCATTAAAGATATGGGGATGTGCAATGCCAATAATTCCAATGTGTGCACTTCGAGCTGCTCTGCACTTCACCCTGGCGTATTGTGATTTCATTGGTGCTGTGTACCCTGTGATGTTTCAAGGGATTTCAGCTCGTTTTGTCTTGGTAGCCATCATCATCATCGGCAAGCAGCAGCAGATGGACAACTCTGAGCTCTACCAGTTCCTCGCCGGCAACGGCGCTTCCTTCTTCACACTCGCATCTTACGGTATGCCTCCTGCTGCAGCCTCCACAATGCACAGTTTCTGCAGCTCCTCTTATTACCACTTGGATTCTTCCGAAATTACCGATACACCCCAGCAAGATAGAGCCCTCGCCGCTCTGAAGAATCACAAGGAAGCTGAGAAGCGCCGAAGAGAGAGGATCAATTCTCACCTCGATAAGCTTCGTACTCTTCTTCCCTGTAATTCTAAGACTGACAAGGCGTCGCTCCTAGCAAAGGTTGTCCAACGAGTGAGAGAGCTGAAACAGCAAACTTCACAAATCCCCGAACTCGAAACCATTCCCTCAGAAACAGATGAAATCACCGTCCTGTCCACTAGCGGAGACTACGCCGGAGACGGCAGGCTCATATTCAAAGCCTCCCTATGCTGTGAAGATCGCTCCGACCTCATACCCGATCTCATCGAAATCCTAAAGTCGCTGCATCTCAAAACCCTCAAAGCAGAAATGGCAACAATAGGAGGAAGAACCCGAAACGTCCTCATTGTGGCCGCCGACAAAGACCACAGCATAGAATCAATCCACTTCCTCCAGAACGCATTGAAATCTCTGCTCGAACGCTCCAACTCAAGCGAAAGATCCAAACGGCGTCGTGTACTCGACCGCAAATTGATTGTCTGA 1077 0.4856 MILHRTVQEKRKKSQFEDDDDDGEEGNGCLSILILVIALGTSVCFIGLVRPGLFIGLGQWREHFCALKIWGCAMPIIPMCALRAALHFTLAYCDFIGAVYPVMFQGISARFVLVAIIIIGKQQQMDNSELYQFLAGNGASFFTLASYGMPPAAASTMHSFCSSSYYHLDSSEITDTPQQDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVQRVRELKQQTSQIPELETIPSETDEITVLSTSGDYAGDGRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATIGGRTRNVLIVAADKDHSIESIHFLQNALKSLLERSNSSERSKRRRVLDRKLIV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0837 358 MobiDBLite consensus disorder prediction 1 24 - -
Lele07g0837 358 CDD ACT_UUR-ACR-like 273 337 - -
Lele07g0837 358 FunFam transcription factor bHLH30 179 242 - -
Lele07g0837 358 Gene3D - 179 244 IPR036638 GO:0046983
Lele07g0837 358 SMART finulus 190 239 IPR011598 GO:0046983
Lele07g0837 358 PANTHER TRANSCRIPTION FACTOR BHLH30 165 353 IPR045847 GO:0003700|GO:0006355
Lele07g0837 358 MobiDBLite consensus disorder prediction 1 18 - -
Lele07g0837 358 Pfam Helix-loop-helix DNA-binding domain 188 233 IPR011598 GO:0046983
Lele07g0837 358 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 184 233 IPR011598 GO:0046983
Lele07g0837 358 CDD bHLH_AtAIG1_like 179 255 - -
Lele07g0837 358 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 243 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0837 Lele-ChrLele07 4806742 4811893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0837 122 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 63.948 2.97e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele07g0837 HLH 3.8e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0837 07 4806742 4811893 Lele07g0837 07 4806742 4811893 ECH
Lele05g0797 05 4749987 4751434 Lele07g0837 07 4806742 4811893 hybridization
Lele06g0645 06 3845519 3846998 Lele07g0837 07 4806742 4811893 hybridization