Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0813 ATGTCGGATAGATTAACCCTAGGCGATGCTGAGCACAGAAAGCTTAAGCGCAAGATGACTGAGGACTCGTCAGAGTCACCACCTTCCGTGGTCGCCGACGAGTCGGAGGGGCTTCTGACTCTGAAGCTGATGGTAGGCGAACCAACCGAGGCCTCTAACAACGAAGAGATAGGGACAAGTAGTAATCAGCAGCAGCAGCGAATATTCTCTTGCAAGTTTTGCGACAAGAAGTTCCATAGCTCTCAAGCACTGGGAGGGCACCAGAATGCTCACAAACGTGAGCGTGTACTCAGAAAAATTGAGAAAGAGCTTGATATGGGCACTTTTGGTCCTCGCTTTTACCCTTGTTATTCAACCATCCCTGCTCTTCCCTACACCGAGTCACCTTTTTATCCAGTTCCTCATCATTATCATGTCAACCCATCACTGGCTCCTTACGGCTTGCACCAGCAGGGGCCAGCCAACTCAGCCCCGGAGGCCTTCCGGTTCGGCTTGAGAAGCTCATGGGCCGCCGATGAAGGAGCGGTTCAACGCAGAGCGAACCGCAGAAGCAATGTTCAGGGTTCTCCATCACCTGCAAATACAAAGCCATCAGATGAATCGGGAGGTGCAAGTGCAGGAGGCTCCGGGAGGAACTCATATATGGGAAGCATTCATGATCCATCATCAGGCCTCGACTTGACTCTCAGGCTTTGA 696 0.5187 MSDRLTLGDAEHRKLKRKMTEDSSESPPSVVADESEGLLTLKLMVGEPTEASNNEEIGTSSNQQQQRIFSCKFCDKKFHSSQALGGHQNAHKRERVLRKIEKELDMGTFGPRFYPCYSTIPALPYTESPFYPVPHHYHVNPSLAPYGLHQQGPANSAPEAFRFGLRSSWAADEGAVQRRANRRSNVQGSPSPANTKPSDESGGASAGGSGRNSYMGSIHDPSSGLDLTLRL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0813 231 MobiDBLite consensus disorder prediction 180 219 - -
Lele07g0813 231 MobiDBLite consensus disorder prediction 1 35 - -
Lele07g0813 231 SUPERFAMILY beta-beta-alpha zinc fingers 66 96 IPR036236 -
Lele07g0813 231 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 42 231 IPR044246 GO:0009788
Lele07g0813 231 MobiDBLite consensus disorder prediction 1 23 - -
Lele07g0813 231 MobiDBLite consensus disorder prediction 174 231 - -
Lele07g0813 231 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 96 IPR013087 -
Lele07g0813 231 Gene3D Classic Zinc Finger 48 107 - -
Lele07g0813 231 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0813 Lele-ChrLele07 4675978 4676673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0813 54 231 C2H2 Transcription Factor Family AT1G24625 32.967 7.64e-14 66.2