Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0761 ATGTCCTCCTCCTCGCCATCTCAGATTCCGGCTGCCTCCATCTCTCCTCCCGAGCATGATTGGAGTGGCTCAAAGAAATTAGAAGTGGGAATGCCTTCTATAGAAAACTCCGAACAACAAGATTTGCAGAACAGTGAGCCAACAAAGATAAGCAGCGCGGAAGAATTTAAAATGATGAAGAAACCAGACAAGATTCAACAGTGTCCACGATGCAACAGTATGGACACAAAGTTCTGTTATTTCAATAACTATAATGTGAATCAACCTCGACATTTCTGCAAGAGCTGCCACAGGTATTGGACTGCTGGTGGAGCAATGAGAAATGTCCCAGTAGGCGCAGGAAGACGAAGGAACAGGCAACTATCCTCGCCATACCATCGCCACACTGCAGTATCCCCCGAAGGCATTCCAGTTCCAACCCCAGAGACAGACCCATCTCCTTACCAACGTTTCTCAACTCTTGAATCCTCATCTGCTTTCAAGTCAGCGCCAGCAGATAATATGAGTACCGTGTTGAGATTTGGTTCAGACGCCCCTGTTTCTGAACCTGCGAGTTCAATTCTGAATCTTGGTAATAGGGAGGAGGCATCCGAGTGTGGATCTTCAGTGACAAATGCTTGTGGTGCTCGGGGAAATGAAGTATCAGAACTTGCAATGCAATGGAACAGAGGTGTGTCCAATCTGATAAATACATCAAATGGTGTGCGATGTTATCCTGCTGCACCATGGGTGTTTCCAGCCCAGTGGTATGCTGATAATCAGATTGGCTCATCACCAAGCATTCCTGTACAATTTGTGGCGGCTCCATGTTGGAGTAATGGGACTGTCTGCTCTGCAGCAGGAACCGGAACAGTTTCAATTGGCTCTAATGGCTGCCTCTCCTCCTCATCCTCAACCAGTAATGGCCTTGGAAAACACTGA 921 0.4723 MSSSSPSQIPAASISPPEHDWSGSKKLEVGMPSIENSEQQDLQNSEPTKISSAEEFKMMKKPDKIQQCPRCNSMDTKFCYFNNYNVNQPRHFCKSCHRYWTAGGAMRNVPVGAGRRRNRQLSSPYHRHTAVSPEGIPVPTPETDPSPYQRFSTLESSSAFKSAPADNMSTVLRFGSDAPVSEPASSILNLGNREEASECGSSVTNACGARGNEVSELAMQWNRGVSNLINTSNGVRCYPAAPWVFPAQWYADNQIGSSPSIPVQFVAAPCWSNGTVCSAAGTGTVSIGSNGCLSSSSSTSNGLGKH 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0761 306 MobiDBLite consensus disorder prediction 121 145 - -
Lele07g0761 306 Pfam Dof domain, zinc finger 63 120 IPR003851 GO:0003677|GO:0006355
Lele07g0761 306 ProSiteProfiles Zinc finger Dof-type profile. 66 120 IPR003851 GO:0003677|GO:0006355
Lele07g0761 306 MobiDBLite consensus disorder prediction 33 48 - -
Lele07g0761 306 MobiDBLite consensus disorder prediction 1 48 - -
Lele07g0761 306 ProSitePatterns Zinc finger Dof-type signature. 68 104 IPR003851 GO:0003677|GO:0006355
Lele07g0761 306 PANTHER CYCLIC DOF FACTOR 2 33 306 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0761 Lele-ChrLele07 4315589 4317320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0761 59 249 C2C2-Dof Transcription Factor Family AT5G39660 40.415 6.43e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele07g0761 zf-Dof 2.7e-31 No_clan