Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0742 ATGGACAGGCTCATAAGATTAGATCCATCAAACATTGTTCTTATCAGAGTCGAAGCAGGGCAGAAATGTGTTGGACATATAACATTACGCAACGTTATGTACACCATGCCTGTGGCCTTCAGGCTTCAACCATTGATCAAGACTCGTTACACAGTGAAGCCTCAATCTGGAATTATATCTCCTTTGGCCACACTTACACTGGAGATCGTTTATCATCTTCCACCAGGAACTAGTCTTCCTCATTCTTATCCTCACTCCGATGATTCTTTCCTTCTTCACAGTGTGGTGGTTCCTGGTGCTGCAATTAAAGAGTCTTCCTCTATGTTTGATTCTGTTCCAAGCGACTGGTTCGCCACTAAGAAGAAGCAGTTGTTTATAGACAGTGGCATCAAGATAATGTTTGTGGGTTCGCCGATTCTGTCTCAACTTGTTGCAGATGGTTCCATGGATGACATCAGAGAAGCCCTGGAACGAAGCGACCCGACATGGAAGGCTTCAGACTCCATGGACTCACAAGGTCAAACATTACTTCATTTGGCTATTTCACAGAGCAGACCGGATCTTGTTCAATTACTCCTCGAATTCAACCCGGATATAGAAGCTCCGAATCGTTCTGGTTCAACCCCACTTGAGGCTGCGTCTTCCTCCGGAGAATCCTTGATAGCTGAGCTTCTATTAGCTCACAAGGCCAACACTGAACGATCGGAATCATCCGTTTGGGGGCCGATTCACCAGGCTGCTAAAGGAGGACACTTGGAGGTTCTTAGGCTTCTTTTACTGAAAGGAGCTAAAGTGGACTCTAAAGCGAAGGATGGTAGCACGGCTTTGCACCTCGCAGTTGAAGAACGAAGACGAGATTGCGCTAGACTTCTGTTGGCTAACGGTGCCAGAACCGACGTTCGCAACGCCAGAGACGGCGACACACCTTTACACATAGCCGCATCCACCGGCGACGATAACATGGTCAAGCTATTGCTACAAAAGGGTGCGAATAAGGAAGTGAGAAATGGGTTGGGGAAAACTGCGTACGACGTTGCCGCCGAGAATGGATATAACCGTCTCTTTGACGCGCTTAAACTAGGGGACGATCTCTGCGTGGCGGCGAGAAAAGGGGAGGTGAGAACCATACAGAGGCTGATCGAGAACGGAGCGTGTATTAATGGGAGAGACCAACACGGCTGGACGGTGCTTCACAGAGCCGCCTTCAGAGGACGAACGGATGCGGTTCGAGCTCTGCTAGAGAAAGGGGTGGATGTGGATGCTAAGGACGAGGATGGGTACACGGCGTTGCATTGCGCGGCGGAGTCAGGTCATGCCGACGTGACGGAGCTGCTGGTGAAGAAAGGAGGAGATGTTGAAGCGAGGACCAATAAGGGTGTGACCGCGTTGCAAATAGCAGAGTCGCTGCACTATGTGGGGATCACGAGGATACTCATCAGCGGCGGGGCTAGTAGGGAGAACAACGGTCAGATTCCGACAACGCCGGCGAATATTCCGTTCGGGAAACAAATGGAGGGTGGGGAGAAGAAGAAGATAATCAGAAACAGAGGGCTTCGGGGTAGCTTCCATCGCTCGGCGGCTCTAGCTTTGATGTAA 1596 0.5019 MDRLIRLDPSNIVLIRVEAGQKCVGHITLRNVMYTMPVAFRLQPLIKTRYTVKPQSGIISPLATLTLEIVYHLPPGTSLPHSYPHSDDSFLLHSVVVPGAAIKESSSMFDSVPSDWFATKKKQLFIDSGIKIMFVGSPILSQLVADGSMDDIREALERSDPTWKASDSMDSQGQTLLHLAISQSRPDLVQLLLEFNPDIEAPNRSGSTPLEAASSSGESLIAELLLAHKANTERSESSVWGPIHQAAKGGHLEVLRLLLLKGAKVDSKAKDGSTALHLAVEERRRDCARLLLANGARTDVRNARDGDTPLHIAASTGDDNMVKLLLQKGANKEVRNGLGKTAYDVAAENGYNRLFDALKLGDDLCVAARKGEVRTIQRLIENGACINGRDQHGWTVLHRAAFRGRTDAVRALLEKGVDVDAKDEDGYTALHCAAESGHADVTELLVKKGGDVEARTNKGVTALQIAESLHYVGITRILISGGASRENNGQIPTTPANIPFGKQMEGGEKKKIIRNRGLRGSFHRSAALALM 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0742 531 ProSiteProfiles Ankyrin repeat region circular profile. 425 457 - -
Lele07g0742 531 SUPERFAMILY PapD-like 2 150 IPR008962 -
Lele07g0742 531 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Lele07g0742 531 ProSiteProfiles Ankyrin repeat profile. 305 337 IPR002110 GO:0005515
Lele07g0742 531 ProSiteProfiles Ankyrin repeat region circular profile. 305 336 - -
Lele07g0742 531 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
Lele07g0742 531 Gene3D - 430 480 IPR036770 -
Lele07g0742 531 ProSiteProfiles Ankyrin repeat profile. 242 270 IPR002110 GO:0005515
Lele07g0742 531 ProSiteProfiles Ankyrin repeat region circular profile. 392 424 - -
Lele07g0742 531 ProSiteProfiles Ankyrin repeat profile. 392 424 IPR002110 GO:0005515
Lele07g0742 531 ProSiteProfiles Ankyrin repeat profile. 205 237 IPR002110 GO:0005515
Lele07g0742 531 Gene3D Immunoglobulins 1 125 IPR013783 -
Lele07g0742 531 ProSiteProfiles Ankyrin repeat region circular profile. 242 266 - -
Lele07g0742 531 Pfam Ankyrin repeats (many copies) 394 446 IPR002110 GO:0005515
Lele07g0742 531 Pfam MSP (Major sperm protein) domain 5 107 IPR000535 -
Lele07g0742 531 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Lele07g0742 531 PRINTS Ankyrin repeat signature 306 321 IPR002110 GO:0005515
Lele07g0742 531 PRINTS Ankyrin repeat signature 408 422 IPR002110 GO:0005515
Lele07g0742 531 ProSiteProfiles Ankyrin repeat region circular profile. 172 204 - -
Lele07g0742 531 SMART ANK_2a 238 267 IPR002110 GO:0005515
Lele07g0742 531 SMART ANK_2a 392 421 IPR002110 GO:0005515
Lele07g0742 531 SMART ANK_2a 172 201 IPR002110 GO:0005515
Lele07g0742 531 SMART ANK_2a 305 334 IPR002110 GO:0005515
Lele07g0742 531 SMART ANK_2a 458 487 IPR002110 GO:0005515
Lele07g0742 531 SMART ANK_2a 271 300 IPR002110 GO:0005515
Lele07g0742 531 SMART ANK_2a 425 454 IPR002110 GO:0005515
Lele07g0742 531 SMART ANK_2a 205 234 IPR002110 GO:0005515
Lele07g0742 531 SMART ANK_2a 359 388 IPR002110 GO:0005515
Lele07g0742 531 Gene3D - 361 429 IPR036770 -
Lele07g0742 531 Pfam Ankyrin repeats (3 copies) 160 232 IPR002110 GO:0005515
Lele07g0742 531 Pfam Ankyrin repeats (3 copies) 243 336 IPR002110 GO:0005515
Lele07g0742 531 Gene3D - 135 360 IPR036770 -
Lele07g0742 531 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 110 354 - -
Lele07g0742 531 SUPERFAMILY Ankyrin repeat 168 495 IPR036770 -
Lele07g0742 531 ProSiteProfiles Ankyrin repeat region circular profile. 271 302 - -
Lele07g0742 531 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 135 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0742 Lele-ChrLele07 4193108 4194703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0742 364 483 Ion Channels AT4G32500 29.139 3.07e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0701 05 4140002 4141603 Lele07g0742 07 4193108 4194703 hybridization
Lele06g0535 06 3221779 3223377 Lele07g0742 07 4193108 4194703 hybridization