Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0730 ATGAACGATCTTCTAACGGATTCATTTGAGATCCCTCGTGAGCAAGGTAATGGTGGTGGTGGAGATATTGAGCTAGGGGTAAATGCAATGAATTCAGCAGATACGGGCTTGGAAAACTTCTTCAAAAAGGTTCAGGAGCTTGATAAGCAATATGCAAAGCTGGATAAGCTTCTAAAAAAGCTCCAGGATGCCCATGAGGAGTCCAAAGCTGTAACCAAGGCTCCTGCCATGAAAACTATTAAGCAGAGAATGGAGAAAGATGTTGATGAGGTTAAGAAAATTGCCCATCATATCAAGACGAAAATTGAAGAACTTGACAAAGAGAATTTGGCAAATAGGCAGAAGCCTGGGTGCGGAAAAGGATCAGGAGTTGACCGGTCTAGAACAGCAACAACTACTGCCTTGAGAAAGAAGCTGAAGGACAAGATGGCTGAATTTCAGGTCCTGCGGGAAGCCATCCATCAAGAATATCGTGAGGTTGTTGAGAGACGGGTCTTTACAGTAACTGGCACGAGAGCTGATGAGGAGACAATTGATAGATTAATTGAGACAGGAGACAGTGAGCAAATTTTCCAGAAGGCTATTCAGGAACAAGGAAGAGGCCAGATAATAGACACCCTGGCAGAAATTCAAGAACGGCATGAAGCAGTTAGAGATGTTGAGAGGAAACTTCTTGAATTACAACAGATATTCATGGACATAGCAGTGCTAGTTGATGCACAGGGGGATATGCTGGACAATATAGAATCACAGGTCTCAACTGCAGTAGATCACGTGCAGCAAGGCAACACTGCCCTCCAGAAAGCCAAAAGCCTTCAGAAGAATTCTAGAAAATGGATGTGCATTGCAATCATTATACTCCTTATTGTTGTCATAATCATTGTCGTTGCCGTCATCAAGCCATGGGTTAAGAAGGGTGCTTAG 924 0.434 MNDLLTDSFEIPREQGNGGGGDIELGVNAMNSADTGLENFFKKVQELDKQYAKLDKLLKKLQDAHEESKAVTKAPAMKTIKQRMEKDVDEVKKIAHHIKTKIEELDKENLANRQKPGCGKGSGVDRSRTATTTALRKKLKDKMAEFQVLREAIHQEYREVVERRVFTVTGTRADEETIDRLIETGDSEQIFQKAIQEQGRGQIIDTLAEIQERHEAVRDVERKLLELQQIFMDIAVLVDAQGDMLDNIESQVSTAVDHVQQGNTALQKAKSLQKNSRKWMCIAIIILLIVVIIIVVAVIKPWVKKGA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0730 307 CDD SNARE_syntaxin1-like 206 268 - -
Lele07g0730 307 FunFam Syntaxin 132 200 300 - -
Lele07g0730 307 Gene3D - 33 161 - -
Lele07g0730 307 FunFam Syntaxin 132 32 161 - -
Lele07g0730 307 Pfam SNARE domain 243 295 IPR000727 -
Lele07g0730 307 CDD SynN 37 194 IPR006011 GO:0016020
Lele07g0730 307 Pfam Syntaxin 39 242 IPR006011 GO:0016020
Lele07g0730 307 Gene3D - 200 300 - -
Lele07g0730 307 SMART tSNARE_6 202 269 IPR000727 -
Lele07g0730 307 MobiDBLite consensus disorder prediction 1 20 - -
Lele07g0730 307 PANTHER SYNTAXIN 40 290 IPR045242 -
Lele07g0730 307 SMART SynN_4 32 158 IPR006011 GO:0016020
Lele07g0730 307 SUPERFAMILY t-snare proteins 35 262 IPR010989 GO:0016020|GO:0016192
Lele07g0730 307 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 207 269 IPR000727 -
Lele07g0730 307 Coils Coil 88 108 - -
Lele07g0730 307 Coils Coil 37 74 - -
Lele07g0730 307 ProSitePatterns Syntaxin / epimorphin family signature. 213 252 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0730 Lele-ChrLele07 4116607 4122287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0730 1 307 SNARE and Associated Proteins AT3G03800 72.313 2.13e-154 432