Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0728 ATGCTCTCAGCTTCTTCATCTACTGATTTCTTCTTAATTTATAGGGTTTTACTGAATCCTCTTGTTCTCATCTTTGTGTTTAGGTGGTCTCTGATAGCTGGGAGGATACCTGGAAGGACCGATAACGAGATTAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATAAGTCAGGGAATAGACCCTAGAACTCACAAGCCCTTAATCACTTTCGACAATAATTCCAAATCTCAACAAGCGTATCATGAATCCAATACAAGCACATCCAGTAATCCTCAATCATCTGCACGAGAGATTGGTAATCATCAGACAAATGCTATCCAAAACAACAGTTCTGTCACTGTTGGGAATAATTGGGGAACAAGTAGCGACAAAGTGATGAGGCTCGAAAATGGGGTTGAGGTTGAAGAACAGGTCGGGAAGATTATGGGTGAGGAAGATGCACTATCTTCGTTTCTGGAATCTTTGATCAACGACAACGAAGTACTTGGGAATCAACAGACGGAGGCTGTCGGCCACCACGTGTTTCCTGTTCCACCGCCACAACATCCAGTGATGGCTCCTTCTTCTTCCCAGCAATTTTTCGATCTTTCCTTTTGGGAAGCTGAATTCCAGAGTTTCGGAAAAGATGAACAGTACGGTTGCCCCTTCAAGTAA 660 0.4333 MLSASSSTDFFLIYRVLLNPLVLIFVFRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLITFDNNSKSQQAYHESNTSTSSNPQSSAREIGNHQTNAIQNNSSVTVGNNWGTSSDKVMRLENGVEVEEQVGKIMGEEDALSSFLESLINDNEVLGNQQTEAVGHHVFPVPPPQHPVMAPSSSQQFFDLSFWEAEFQSFGKDEQYGCPFK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0728 219 Pfam Myb-like DNA-binding domain 28 52 IPR001005 -
Lele07g0728 219 ProSiteProfiles Myb-like domain profile. 28 52 IPR001005 -
Lele07g0728 219 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 28 142 - -
Lele07g0728 219 MobiDBLite consensus disorder prediction 77 98 - -
Lele07g0728 219 Gene3D - 16 100 - -
Lele07g0728 219 CDD SANT 28 52 IPR001005 -
Lele07g0728 219 SUPERFAMILY Homeodomain-like 24 62 IPR009057 -
Lele07g0728 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 56 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0728 Lele-ChrLele07 4108883 4109542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0728 4 160 MYB Transcription Factor Family AT3G13540 43.038 3.65e-24 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele07g0728 Myb_DNA-binding 6.1e-06 CL0123