Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0727 ATGGAAGAATCTGCGGGATCGCAGTGGAGGCTCCACATGGAGCTTCTTCGTGCCTTCACGCTTATCCTTTCAACTCCTTTTGACTTGGCTACATTTGCGGAAGCAAAGGACAATGACTCGAGTGATTTGCCAAATTTGTACATGGATCGATTGACATTGTTTTGTGACATTTCTGGATACTGGATTAGGAGGGTACAAATCCAATTAAGTAAAACTCCAACAGACAAGACAGGTATGGCAGTCATTTTATTGGAAGTCAAAGAAGCAATTGAAAGATCCCATAAACATTCTCTCTCAGATTCCCACTTTCTCAAGCCTCAACTTGTGATGGAAATTCAATTCCAGCAGCCAAAGCAGCAACATCAGAAGGCAGGCATTCCGATCAGCAAAGGAGGGAAATTCAAAGGAGGAGATAGAAGCCGCAGCAACCCAAACAAGTTTGTAGGGGTGAGGCAGAGACCTTCAGGGAGATGGGTGGCTGAGATCAAAGACACAACCCAGAAGATAAGAATGTGGCTTGGCACATTTGAGACTGCAGAGGAGGCTGCCAGAGCTTATGATGAAGCTGCTTGCCTTCTTCGAGGAGCCGACACTCGCACCAACTTCATCACCCATGTCTCCTTGGATTCTCCTCTCGCCTCTCGGATTAGAAATCTTCTCAACAACAAAAAATCTGGAACTAAACAACAACAACAAGATCGTGTGGTAGCAGCCTCTGCCCCTAAAGCCAGAAGAACCAATACCAGCACCACTAGTAGTACTAGTGGTAGCAGTACTAGTATTAGCAGTAGTTCTAGCAATAATATTGACAACAATGACAGTTCTCTTTCTAGTGGGACAGTCCAAGGTGCCAATCTGTTTGATGATGCTTATAGACCAGATATGAGCAATTGCAAGGAGGAATTCGGGTTGGGTTCGACGTCCAATCTTTCATGGGGTGGTTTTGGAGCAGTTTTTGATCGGTTTTCTTTTGCTCAGGTTTCAGATATTCCTAAGACTGATGGGGGTTTGTCTAATATTGCTGACTCGGATCTTTTAGAATTTGAAAGGATGAAAGTGGAGAGGCAAATATCAGCTTCACTCTATGCAATTAATGGAGTGCAAGAGTACATGGAAACTGTTCAGGACTCCAATGAAGCTCTTTGGGATCTTCCACCCTTGTGTTCACTGTTCTTTTTAACTGCTCTTGTGGACCCAATAGGTCTTCTATTTGACTGTGCTTTCTTAATCCTTTTATGCCATTTGGCTTATGAGGATCACAAGGAGGCAGAGCCTGCAAAAACAGCCAGCTGGATAATTCCAATAGTTGAACTGTGA 1317 0.4396 MEESAGSQWRLHMELLRAFTLILSTPFDLATFAEAKDNDSSDLPNLYMDRLTLFCDISGYWIRRVQIQLSKTPTDKTGMAVILLEVKEAIERSHKHSLSDSHFLKPQLVMEIQFQQPKQQHQKAGIPISKGGKFKGGDRSRSNPNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGADTRTNFITHVSLDSPLASRIRNLLNNKKSGTKQQQQDRVVAASAPKARRTNTSTTSSTSGSSTSISSSSSNNIDNNDSSLSSGTVQGANLFDDAYRPDMSNCKEEFGLGSTSNLSWGGFGAVFDRFSFAQVSDIPKTDGGLSNIADSDLLEFERMKVERQISASLYAINGVQEYMETVQDSNEALWDLPPLCSLFFLTALVDPIGLLFDCAFLILLCHLAYEDHKEAEPAKTASWIIPIVEL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0727 438 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 118 357 - -
Lele07g0727 438 SMART rav1_2 146 209 IPR001471 GO:0003700|GO:0006355
Lele07g0727 438 CDD AP2 146 202 IPR001471 GO:0003700|GO:0006355
Lele07g0727 438 Gene3D AP2/ERF domain 145 204 IPR036955 GO:0003700|GO:0006355
Lele07g0727 438 PRINTS Ethylene responsive element binding protein signature 147 158 IPR001471 GO:0003700|GO:0006355
Lele07g0727 438 PRINTS Ethylene responsive element binding protein signature 169 185 IPR001471 GO:0003700|GO:0006355
Lele07g0727 438 Pfam AP2 domain 146 195 IPR001471 GO:0003700|GO:0006355
Lele07g0727 438 MobiDBLite consensus disorder prediction 120 150 - -
Lele07g0727 438 ProSiteProfiles AP2/ERF domain profile. 146 203 IPR001471 GO:0003700|GO:0006355
Lele07g0727 438 MobiDBLite consensus disorder prediction 222 278 - -
Lele07g0727 438 FunFam ethylene-responsive transcription factor RAP2-11 145 204 - -
Lele07g0727 438 SUPERFAMILY DNA-binding domain 146 203 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0727 Lele-ChrLele07 4101632 4104152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0727 133 394 AP2-EREBP Transcription Factor Family AT5G19790 42.164 1.19e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g0727 AP2 1.3e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1343 13 23375283 23376101 Lele07g0727 07 4101632 4104152 CCT
Lele07g0727 07 4101632 4104152 Lele07g0727 07 4101632 4104152 ECH
Lele05g0689 05 4059039 4061555 Lele07g0727 07 4101632 4104152 hybridization
Lele06g0519 06 3132835 3133764 Lele07g0727 07 4101632 4104152 hybridization