Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0709 ATGGAGGGTGGTGGGCGATGGTGCAACTCGTGCTCTAACATGGTGAATCCAATGAGGGAAGGAGAGAACAGCAAATGCCCAGTTTGTGGGTCAGAATTTGCAGAGGCAACAATGGAGAGCCTGAGATCACCGGACCAAAACGAAGGAAGCGATTTGATGAGGTCGGCCTCTGTGTTCTCTCTTTACTCGCCAATATTACTGGGCTTGATGAGTGCTCTCAGACCTGCTCTAGCAACCATCAGCAATAACAACAACAATGGTGGTTCGAGTTCGAGTTCAAGTTCAAGGGAGGAGGAAGACGGTGACGAGCAAGATCAGATAGGACAGCACGGTGACCTTGTGGTGAGAAGAAGGAGAAGAACATCGTCCACTTCTCTCATGATTGTCTTTCGTCGTCTCCACGATAGGATGGCGACGCAGCCGGAATCTGATCAGAATAATACTAACACAGAAAACGATCATAGAAACAACAATAACGGTCGCGATAATAATAATAATAATAACTACGTGAATCTCAACGTGGTTGTCATTGATCCGTTCAACGAAGAGGCCTTGATTCTGAGAGGTCCTTCACGGGCTAGAAATAGTAATCCGTTAATAGAGAATCCGATGGGGTCTCTGGGTGACTTTCTGGATGGACCTGGGTTTGGGTTATTACTGCAACATTTGACACATAATAATGAGCCTAATAGATACGTGAATAATGTGAACCCGCCGGCGCAGAAGGCGGCGATAGAAGCGATGCCGACGGTGACGACGGAGGAGAATATGCAGTGCATAATATGTTTGGAGGATGCAGAGGTTGGGAGTGAAGTGAAGGAGATGCCGTGTGGGCATAAGTTTCACAGTGACTGCATTATCTCGTGGCTGAAACTTCGGAGTTCTTGCCCGGTTTGTAGGTTTCAGTTGCCGTCCGAGGATACCAAGTTCGAAGCCAACGGTGGACGTCGGAATGAAGGCTATCCGAGTAATGATCAGGTGATGGATAGAGAACAGAGAATGAGTTTTGGAAGAAGGAATTGGCTCTCCATATTGCAGCCATTTGATTACTTTCTTCCTTCTCCCTGA 1068 0.4728 MEGGGRWCNSCSNMVNPMREGENSKCPVCGSEFAEATMESLRSPDQNEGSDLMRSASVFSLYSPILLGLMSALRPALATISNNNNNGGSSSSSSSREEEDGDEQDQIGQHGDLVVRRRRRTSSTSLMIVFRRLHDRMATQPESDQNNTNTENDHRNNNNGRDNNNNNNYVNLNVVVIDPFNEEALILRGPSRARNSNPLIENPMGSLGDFLDGPGFGLLLQHLTHNNEPNRYVNNVNPPAQKAAIEAMPTVTTEENMQCIICLEDAEVGSEVKEMPCGHKFHSDCIISWLKLRSSCPVCRFQLPSEDTKFEANGGRRNEGYPSNDQVMDREQRMSFGRRNWLSILQPFDYFLPSP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0709 355 MobiDBLite consensus disorder prediction 140 167 - -
Lele07g0709 355 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 225 306 IPR013083 -
Lele07g0709 355 SUPERFAMILY RING/U-box 248 305 - -
Lele07g0709 355 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 110 304 - -
Lele07g0709 355 MobiDBLite consensus disorder prediction 81 118 - -
Lele07g0709 355 MobiDBLite consensus disorder prediction 132 167 - -
Lele07g0709 355 FunFam E3 ubiquitin-protein ligase RNF181 228 306 - -
Lele07g0709 355 SMART ring_2 259 299 IPR001841 -
Lele07g0709 355 Pfam Ring finger domain 258 300 IPR001841 -
Lele07g0709 355 ProSiteProfiles Zinc finger RING-type profile. 259 300 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0709 Lele-ChrLele07 4013470 4014537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0709 143 320 C3H Transcription Factor Family AT1G26800 31.285 6.33e-23 93.2