Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0707 ATGTACTATCATCATCAGCAACATCAAGCAAAGAACATTCGCTCTTTAAGGATGCCCAACCCTTCTGAGAGGCATATGATTGTTCATGGTGGAAGTGGAACTGGAGATTCAGGACTTGTCCTCTCAACTGATGCTAAGCCTAGACTAAAATGGACACCAGATCTCCATGAACGCTTCGTCGAAGCAGTCAATCAGCTAGGAGGGCCAGACAAAGCTACACCAAAAATAGTATTGAAACTTATGGCGATTCCTGGACTTACTCTATACCACTTAAAGAGTCATCTACAGAAATACAGACTCAGTAAAAGTCTGCATGGACAGGCCAATAGTGGAACCTATAGAAACGAAGCAGCAGGCCAAATGTCTGAGACAAGTGGAGTTCATACGAAAAATTTAAGCATCAGACTTCAGCCAAACAAGAACATAGAAATAAATGAGGCACTACAGATGCAAATTGAAGTGCAAAGAAGGCTGCACGAGCAGCTCGAGGTACAGAGACACTTGCAGCTTCGTATAGAGGCTCAAGGGAAGTATCTCCAAGGAGTGCTGGAGAAAGCCCAAGAGACAATTGAGAGACAGAATCTTGGCACAGCAGAACTTGAAGCTGCCAAGGTTCAACTCTCTGAACTGGCATCCAAAGTATCAACTCAATACATAGAACCTGCATTTTCCGAGCTGAAAGAATTACAGGCACTATGGCCTCAGCAAGCACAAGTGACCAAAACCACCAATTGTGCAATGGATAGCTGCTTGAAATCTAGAGATGGATCTCAGCAGAGAGACCAAGACACACATTACGCTGGTCTAAATCTGATATTATGTGATGGAACTCCATTTTTAAGATCAAAAGAGGGTGCTCCAGAACCTATTCTTCTGAAGTCTGATCGCACATCATGTGATGACCAGCTGCAGGAGAAAATTCTGTTTCTTTTCCCATCAAACGATGATGCACATGAAAGAAACTCAAAACTCATATCCATGAATGTTGGACTTGAAGGGGAAGAAAGCTTGGGGAAACCACCTGTTTTGAAGGATGATTTGAAGTTAGAAGAAGAAAGCTGGTTGAGAAAGGAAAGAGCTCATGAAAATGGGGTTGTGCCAGGTAAACTGAACTATGAGAAAATTTCTCAAGACTATAGGCTGTCTAACTCTGAAACCACACTGGACCTGAATGTTAATGATCAAAATGATGCTTCTTCTAACTGCCGACAGTTTGACTTGAATGGATTTAGCTGGAATTGCTAG 1245 0.4249 MYYHHQQHQAKNIRSLRMPNPSERHMIVHGGSGTGDSGLVLSTDAKPRLKWTPDLHERFVEAVNQLGGPDKATPKIVLKLMAIPGLTLYHLKSHLQKYRLSKSLHGQANSGTYRNEAAGQMSETSGVHTKNLSIRLQPNKNIEINEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQGVLEKAQETIERQNLGTAELEAAKVQLSELASKVSTQYIEPAFSELKELQALWPQQAQVTKTTNCAMDSCLKSRDGSQQRDQDTHYAGLNLILCDGTPFLRSKEGAPEPILLKSDRTSCDDQLQEKILFLFPSNDDAHERNSKLISMNVGLEGEESLGKPPVLKDDLKLEEESWLRKERAHENGVVPGKLNYEKISQDYRLSNSETTLDLNVNDQNDASSNCRQFDLNGFSWNC 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0707 414 Coils Coil 183 203 - -
Lele07g0707 414 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Lele07g0707 414 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Lele07g0707 414 Coils Coil 145 165 - -
Lele07g0707 414 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 21 259 IPR044848 GO:0003700
Lele07g0707 414 Gene3D - 45 103 - -
Lele07g0707 414 FunFam Myb family transcription factor 45 103 - -
Lele07g0707 414 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Lele07g0707 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Lele07g0707 414 Pfam MYB-CC type transfactor, LHEQLE motif 142 189 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0707 Lele-ChrLele07 4007247 4009254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0707 78 413 G2-like Transcription Factor Family AT3G04030 46.243 3.29e-81 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele07g0707 Myb_DNA-binding 1.7e-07 CL0123