Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0699 ATGAACGATCTAATGACCAAATCATTCACCGGCTACGTAGATCTGAAGAAAGCCGCCATGAAAGATGTGGATCTGGAAGCCGGTCTTCCTCCAAACGACGTAGAACTAAGCTCTTCCACGACCAACATGGATACTGACATGGGTCGCTTCCTCGAAGAGGCAGAGATAGGTCATCTCCAAGAAATATTGAGCAGACTTCAGCAGGAGAACGAAGAGAGCAAATCCCTTCATAAGCCTGAAGCCCTGAAATCCTTAAGGAACAGGATCAAAGCCGACATTGTGACTGTGCTCAAGAAGGCCAGAACCATACGGCGGAGGACGATGACGGAGTACAAAGACACAGTGGGAAGACGATATTGCCCAGTAACCGGAGAACACTCAAATGAGGAAGTCATAGAGAAGATAATCTCAACTGGAGGAGAGAGATTCTTGAGCAAAGCAATTCAAGAGCACGGAAGAGGAAGAGTTCTAGAGACAGTGGTGGAGATACAGGACAGGCATGAGGCAGCTAAAGATATAGAGAAGAGCCTTCTAGAACTGCACCAGGTGTTTCTGGATATGGCCGTGACGGTGGAGGCACAGGGCGAGAAGATGGATGATATTGAACACCATGTTCTTCATGCTTCTCACTATGTGAAGGATGGGACTAAGGATTTGCAGAGTGCATAG 669 0.4753 MNDLMTKSFTGYVDLKKAAMKDVDLEAGLPPNDVELSSSTTNMDTDMGRFLEEAEIGHLQEILSRLQQENEESKSLHKPEALKSLRNRIKADIVTVLKKARTIRRRTMTEYKDTVGRRYCPVTGEHSNEEVIEKIISTGGERFLSKAIQEHGRGRVLETVVEIQDRHEAAKDIEKSLLELHQVFLDMAVTVEAQGEKMDDIEHHVLHASHYVKDGTKDLQSA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0699 222 Gene3D - 27 214 - -
Lele07g0699 222 Coils Coil 56 76 - -
Lele07g0699 222 SUPERFAMILY t-snare proteins 56 215 IPR010989 GO:0016020|GO:0016192
Lele07g0699 222 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 160 222 IPR000727 -
Lele07g0699 222 PANTHER SYNTAXIN 52 221 IPR045242 -
Lele07g0699 222 Pfam Syntaxin 103 195 IPR006011 GO:0016020
Lele07g0699 222 ProSitePatterns Syntaxin / epimorphin family signature. 166 206 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lele07g0699 222 SMART tSNARE_6 155 222 IPR000727 -
Lele07g0699 222 CDD SNARE_syntaxin1-like 159 220 - -
Lele07g0699 222 FunFam Syntaxin 132 153 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0699 Lele-ChrLele07 3957840 3958662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0699 1 222 SNARE and Associated Proteins AT1G08560 52.347 1.45e-89 264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0489 06 2969669 2972957 Lele07g0699 07 3957840 3958662 hybridization