Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0683 ATGAGTTTTCAAGATCTCCAGGGCGGGCCCAGGCGACCCGCTTCTCGAACTCAATCGCCGTCGCAGGCGGTGGCTGCGGGAATTTTCCAGATCAATACAGGCGCTTCCACTTTCCGACGACTCGTTGATGGCATTGGAACTGTCAAAGATACTGTCGCTCACCGCCAGAAGCTGTATGTTTCTGTCTACTTTCTGAAACTAACTACCCTTTTCTTTTATACGGTTTTTCTGTTGCGATTTTGTTTGTTACTTAACCGCTGTCTTTGGATTTGTGTACTATTTGGTAGGCACGATACAAGGCAGCGGATATTGCAGCTGGTGAAGGATACTTCTGCGAAGCTCAAAGCCTTGAGCGATTCCGATCTCGCTGCCCATGCTGATTCTGGTAGGAAAATTGAAGATGCTAAGCTGGCGAGAGATTTCCAGACCGCATTACAAGAATTCCAGAGAGTGCAACAGCTTGCTTCTGAGCGCGAATCTACCTACCTTCCTGCTGGTCCTGCTTCTTTACCGGCGAGCTCTGGCTCTGTTGGAGAATCAACTGGCATAGGTCAGGAAAGCCAACCTTTTATCAGGGAACAAAAGAGGCAGGAGATACTCTTGTTAGATAATGAAATCGCATTCAATGAGTCCATGATTGAAGAAAGAGAACAGGGCATCAAGGAGGTAGAGGTGCAAATTGGACAAGTAAATGAAATATTCAAGGACCTAGCTGTTCTGGTTCATGAGCAGGGGGTAGTTATTGATGATATTCAATCAAATATTGATACTTCTGCGGGTGCAACAACCCAAGCTACTACAGAGTTAGCCAAGGGTTCCAAAAGTATGAAATCTAAATCTTCATGGTGTTGGTGGGTGCTTACAATTTTTGTTATAGTGGTGGTTATCGTGCTTATTGTTCTCATTATTTAG 912 0.4518 MSFQDLQGGPRRPASRTQSPSQAVAAGIFQINTGASTFRRLVDGIGTVKDTVAHRQKLYVSVYFLKLTTLFFYTVFLLRFCLLLNRCLWICVLFGRHDTRQRILQLVKDTSAKLKALSDSDLAAHADSGRKIEDAKLARDFQTALQEFQRVQQLASERESTYLPAGPASLPASSGSVGESTGIGQESQPFIREQKRQEILLLDNEIAFNESMIEEREQGIKEVEVQIGQVNEIFKDLAVLVHEQGVVIDDIQSNIDTSAGATTQATTELAKGSKSMKSKSSWCWWVLTIFVIVVVIVLIVLII 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0683 303 PANTHER SYNTAXIN 97 294 IPR045242 -
Lele07g0683 303 CDD SNARE_Qa 213 269 - -
Lele07g0683 303 SUPERFAMILY t-snare proteins 97 265 IPR010989 GO:0016020|GO:0016192
Lele07g0683 303 Gene3D - 12 166 - -
Lele07g0683 303 Pfam SNARE domain 247 298 IPR000727 -
Lele07g0683 303 Gene3D - 204 303 - -
Lele07g0683 303 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 210 272 IPR000727 -
Lele07g0683 303 SMART tSNARE_6 205 272 IPR000727 -
Lele07g0683 303 MobiDBLite consensus disorder prediction 1 21 - -
Lele07g0683 303 Pfam Syntaxin-like protein 97 162 IPR006011 GO:0016020
Lele07g0683 303 FunFam Syntaxin-22 like 203 303 - -
Lele07g0683 303 MobiDBLite consensus disorder prediction 163 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0683 Lele-ChrLele07 3881401 3883563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0683 1 290 SNARE and Associated Proteins AT5G46860 48.980 4.89e-83 249