Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0678 ATGGCTATAGGTGGATACTTGCACCGACTTGAGGCAAATAGTGAACCGCCTTTGGGCCGTGGTCCATATCACTCTCTTATAAGCAAACCAAGCTTGCTTTGTCTTCCCTCTCCCGCCGCTCAACCAGTCTTCTCCTCTTCAAAAGCTAGGGTTTTGTTTGAGCATTCCTGCTCTTCGACTTTTCACAAGATGGTTCTTCCAAATGATATTGATCTGTTAAATCCACCTGCTGAGCTGGAGAAGAGAAAACACAAGCTCAAGCGTCTTGTGCAGTCTCCAAACTCTTTCTTCATGGATGTGAAGTGCCAAGGTTGCTTCAACATAACCACTGTTTTCAGCCACTCTCAGACTGTTGTAGTATGTGGCAACTGCCAAACTGTCTTGTGCCAGCCCACAGGTGGACGGGCTAGGCTAACAGAGGGCTGCTCTTTTAGGAAGAAGGGAGACTAA 450 0.4733 MAIGGYLHRLEANSEPPLGRGPYHSLISKPSLLCLPSPAAQPVFSSSKARVLFEHSCSSTFHKMVLPNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0678 149 PANTHER 40S RIBOSOMAL PROTEIN S27 48 149 IPR000592 GO:0003735|GO:0005840|GO:0006412
Lele07g0678 149 Hamap 30S ribosomal protein S27e [rps27e]. 87 147 IPR000592 GO:0003735|GO:0005840|GO:0006412
Lele07g0678 149 Gene3D - 68 148 IPR023407 -
Lele07g0678 149 SUPERFAMILY Zn-binding ribosomal proteins 93 147 IPR011332 GO:0006412
Lele07g0678 149 Pfam Ribosomal protein S27 93 147 IPR000592 GO:0003735|GO:0005840|GO:0006412
Lele07g0678 149 FunFam 40S ribosomal protein S27 64 149 - -
Lele07g0678 149 ProSitePatterns Ribosomal protein S27e signature. 101 133 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0678 Lele-ChrLele07 3858372 3859514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0678 64 149 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 94.186 1.73e-58 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0678 07 3858372 3859514 Lele07g0678 07 3858372 3859514 ECH
Lele05g0645 05 3802984 3803939 Lele07g0678 07 3858372 3859514 hybridization
Lele06g0469 06 2861967 2863090 Lele07g0678 07 3858372 3859514 hybridization