Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0675 ATGGAATGGGCGTATGGAGACGACACATTCCCGGGTCCATTACACCAAGATGCCCTGTACACGACACAGAAAATAAACCAATTCAACCTGCGTACCAGACAACAAATATGCCACTTTACAGCCCACAAATGGCATTCTATTGTGTCATCATCAACTGGAACGTCAAAACTCAGTCTTGATCTGAAGGGGTTTGTTGTTGATTTTGATGTCCCCAGTTTCTCTTTCTGTATTTATTTCCTGAGTCCAATTACTGAATATCTTGATTTGATTGTTAGGTTTATGTCAAGGATAGATAATTGTTTCATTTGGGGGAAATGTCTCGATTCTGGGTCTCTTGCAGCGATAGTCGGAGGAGCTGCAGGGGCCGTGGCATTGGTAGGGATAGTTATAGCACTCATATGCTTCTGCCTATCTCGCAGGAGGAGTGTCTCAAGGACTTCAGAGACAGGCTCCTCTGATCCTTCCCAAGTGGCAAGACATGGTGGGATTGAGTTGACTTTACGAGATACCAGGCGGTTTGAGATGGAAGAACTATCTCAGGCCACAAAGAATTTCAGTGACAAAAATTTGATCGGAGAAGGCAAGTTTGGGGAGGTTTACAAAGGCTTACTTCATGATGGTATACTTGTGGCCATCAAAAAGCGGCAGGGATTTCCGAGCCAGGAATTTGTTGATGAGGCTCGCTACCTCTCATCCATTCATCATCGGAATCTCGTAACTCTTTTGGGCTATTGCCAGGAACAAAATCTGCAGTTTCTTATATACGAATATGTGCCTAATGGGAGCGTCTCTAGTCACTTGTATGGTGCTGGTCAACAATTGAAAGAGAAGCTAGAATTCAAGCTTAGACTTTCAATAGCTCTAGGTGCAGCTACAGGTTTGGCTCATATTCATTCCTTGAGCCCCCGGTTGGTGCATAAGAATTTCAAAACAGCCAATGTTCTGGTGGATGAAAATTTCATCGCTAAGGTGGCAGATGCTGGATTGCGCAATTTCCTGGGAAGAGGTGATATTGCAGGCCCATCTTCTCAAGTTGCAGCAGATGAGATATTCCTTGCTCCCGAGGTTAGAGAGTTCAGACGATTTTCTGAAAAGAGTGATGTATACAGTTTTGGGGTATTTTTGCTCGAACTATTAAGCGGGAAGGAAGCAACAGAATCTCCAACTTCAGACTCTAATCAGAATCTAGTTGAATGGGTGCAAGTTAATGAAGATCATCGCGTTATGTCTAACATCATTGATCAGAGATTGGGGAGCAGTTTCACGGAGGAAGGTATGGAAGAGTTTATCTTGCTGGTAGCTCGATGTTTGAGTCCTTCAAGTGAGAGAAGACCTTCCATGAGTTATGTATTAATGGAACTTGAACGGATTCTTGACAAGGAAATGAACTTGACAACAATGATGGGCGAAGGCACCCCAACCGTGACCCTTGGAAGTCAGTTGTTCAAAGCAACAAGGTAA 1461 0.4381 MEWAYGDDTFPGPLHQDALYTTQKINQFNLRTRQQICHFTAHKWHSIVSSSTGTSKLSLDLKGFVVDFDVPSFSFCIYFLSPITEYLDLIVRFMSRIDNCFIWGKCLDSGSLAAIVGGAAGAVALVGIVIALICFCLSRRRSVSRTSETGSSDPSQVARHGGIELTLRDTRRFEMEELSQATKNFSDKNLIGEGKFGEVYKGLLHDGILVAIKKRQGFPSQEFVDEARYLSSIHHRNLVTLLGYCQEQNLQFLIYEYVPNGSVSSHLYGAGQQLKEKLEFKLRLSIALGAATGLAHIHSLSPRLVHKNFKTANVLVDENFIAKVADAGLRNFLGRGDIAGPSSQVAADEIFLAPEVREFRRFSEKSDVYSFGVFLLELLSGKEATESPTSDSNQNLVEWVQVNEDHRVMSNIIDQRLGSSFTEEGMEEFILLVARCLSPSSERRPSMSYVLMELERILDKEMNLTTMMGEGTPTVTLGSQLFKATR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0675 486 Gene3D Phosphorylase Kinase; domain 1 148 257 - -
Lele07g0675 486 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 121 463 - -
Lele07g0675 486 ProSitePatterns Protein kinases ATP-binding region signature. 191 214 IPR017441 GO:0005524
Lele07g0675 486 Gene3D Transferase(Phosphotransferase) domain 1 258 472 - -
Lele07g0675 486 FunFam Protein kinase superfamily protein 258 471 - -
Lele07g0675 486 FunFam Protein kinase superfamily protein 150 257 - -
Lele07g0675 486 Pfam Protein tyrosine and serine/threonine kinase 189 453 IPR001245 GO:0004672|GO:0006468
Lele07g0675 486 ProSiteProfiles Protein kinase domain profile. 185 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0675 486 SUPERFAMILY Protein kinase-like (PK-like) 166 462 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0675 Lele-ChrLele07 3839215 3845017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0675 105 470 Receptor kinase-like Gene Family AT5G56890 35.500 7.13e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lele07g0675 PK_Tyr_Ser-Thr 2.5e-40 CL0016