Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0667 ATGCAATTGATTCCGGATGGACAAGGCAATCTCCTCGGCAATGGATGCGATTGCGATACACTGGTGCCGGCGAGGGCACCCCCTGCACGTTTTGCAGCCACGTAGAGAGAGCTGAACAAGGTGGATCATCGAAGGCATGGGAAGAGACCTCTACCTTCTGATCACGATGAATCAGAGGCCAAAAGAGAAGGTTTCATGTCTCGGGCTCAGACATCACCATCTGATCAGACCCAAAAGGAAGAAACTTCATCACCTTCCTTTTCGTATCTTATCAGCACCAGTGATGATACTAAAACCTTCTCTGTCCCAATCTCACATGCTCAACTAAGTACCTCTTCTGGGTTGATCCAGAAGCAGGACCCATCATCCCAGCCGCAGACATATCAAATTCAAGGCAACAATAATGTGAGAAGAAGAAACTATAGAGGGGTGAGGCATAGGCCATGGGGGAAGTGGGCAGCGGAAATCCGAGACCCGAAAAAAGCAGCTAGAGTGTGGCTTGGAACCTTCGAGACGGCCGAGGACGCTGCCGCTGCTTATGATGCTGCAGCATTAAGGTTCAAAGGAAGCAAAGCAAAGCTTAATTTCCCCGAACGTGTTTCTTTAGCTACTTCTTCAGCCATCCCTTCTTCACAAACGTCCCAGCTTCAGGCTTCTCATCCTACGCTGCCAACACCAGAGGTGGCACGAACGGTGTCTCGCTCTATAGCGCCGTCGACGGACGATCAAGGGTTCCCGAATCTGTTCCAGTACGCGCAGCTGCTTTGGGGCGGTGATGATGACCTGCAAAGAGCTTCTTCGAGACTTCATAGTTATCATCAGAATGAGCCATTTCTTTATGATTCTTCTCCGTTATTCTCGTCATCATCAGGAGGGTCTTCCTCGTCTGCTTCTATGCCTGGGTCTGATCAGCGGCACGTTCCAGATACTCAGAGAGCACAAAAGGGAGATTATGGCTCTTCTTCTTCTGGTTCTTGTTTTTTTGATGAAAGAAACACGAGGGGATAG 1008 0.495 MQLIPDGQGNLLGNGCDCDTLVPARAPPARFAATXRELNKVDHRRHGKRPLPSDHDESEAKREGFMSRAQTSPSDQTQKEETSSPSFSYLISTSDDTKTFSVPISHAQLSTSSGLIQKQDPSSQPQTYQIQGNNNVRRRNYRGVRHRPWGKWAAEIRDPKKAARVWLGTFETAEDAAAAYDAAALRFKGSKAKLNFPERVSLATSSAIPSSQTSQLQASHPTLPTPEVARTVSRSIAPSTDDQGFPNLFQYAQLLWGGDDDLQRASSRLHSYHQNEPFLYDSSPLFSSSSGGSSSSASMPGSDQRHVPDTQRAQKGDYGSSSSGSCFFDERNTRG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0667 335 FunFam Ethylene-responsive transcription factor 2 139 198 - -
Lele07g0667 335 MobiDBLite consensus disorder prediction 32 90 - -
Lele07g0667 335 MobiDBLite consensus disorder prediction 314 335 - -
Lele07g0667 335 ProSiteProfiles AP2/ERF domain profile. 140 197 IPR001471 GO:0003700|GO:0006355
Lele07g0667 335 MobiDBLite consensus disorder prediction 283 307 - -
Lele07g0667 335 Pfam AP2 domain 140 189 IPR001471 GO:0003700|GO:0006355
Lele07g0667 335 SMART rav1_2 140 203 IPR001471 GO:0003700|GO:0006355
Lele07g0667 335 Gene3D AP2/ERF domain 139 199 IPR036955 GO:0003700|GO:0006355
Lele07g0667 335 SUPERFAMILY DNA-binding domain 140 198 IPR016177 GO:0003677
Lele07g0667 335 PRINTS Ethylene responsive element binding protein signature 141 152 IPR001471 GO:0003700|GO:0006355
Lele07g0667 335 PRINTS Ethylene responsive element binding protein signature 163 179 IPR001471 GO:0003700|GO:0006355
Lele07g0667 335 CDD AP2 143 198 IPR001471 GO:0003700|GO:0006355
Lele07g0667 335 MobiDBLite consensus disorder prediction 47 64 - -
Lele07g0667 335 MobiDBLite consensus disorder prediction 207 241 - -
Lele07g0667 335 MobiDBLite consensus disorder prediction 283 335 - -
Lele07g0667 335 MobiDBLite consensus disorder prediction 65 90 - -
Lele07g0667 335 PANTHER DNA-BINDING DOMAIN 83 281 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0667 Lele-ChrLele07 3802791 3804717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0667 119 217 AP2-EREBP Transcription Factor Family AT5G61890 71.287 1.10e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g0667 AP2 2.1e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0667 07 3802791 3804717 Lele07g0667 07 3802791 3804717 ECH
Lele07g0667 07 3802791 3804717 Lele08g0469 08 2873322 2874606 ECH
Lele21g1628 21 24240294 24243413 Lele07g0667 07 3802791 3804717 ECH
Lele22g1611 22 21628301 21644118 Lele07g0667 07 3802791 3804717 ECH
Lele23g0383 23 2773051 2774713 Lele07g0667 07 3802791 3804717 ECH
Lele05g0636 05 3743641 3744918 Lele07g0667 07 3802791 3804717 hybridization
Lele06g0456 06 2798782 2800662 Lele07g0667 07 3802791 3804717 hybridization