Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0620 ATGGACTGGGGCTGGAAAGAGTTGGCGTGGGATCCGTCTCGGTCGGAGCTATCAAATGGAGCGGCTTCGGTGGACTTGAGTCTTGGAGAGACTTCCGATTTCACACAAAAATCATCCTCGTACACGCCTAAGGACTTACCAAGAGACTCGAAATCGGCATCATCGGCGACAAAGAGGAGCCGTACGCTAAATGGATCGATGCAGAGTGTGTCGTGCTTGGTGGATGGATGCGACTCCGACCTGAGTGATTGCAGAGAGTATCATCGGCGACACAGAGTGTGTGAGAAGCACTCCAAGACGCCCAATGTGTTGGTAGGGGGAAAGCAGCAGCGATTCTGCCAGCAATGCAGCAGATTTCATTCTCTGGGGGAGTTTGATGGAGTTAAGAGGAGTTGCAGGAAACGTCTTGATGGACATAACAGGCGCAGAAGGAAGCCTCAGCCGCCTTCTCTTTTCATGGCTGCTGAGAAATTCCTGAGCGGCTTCAAAGGACCCAGAATCCTTCATTTTGGTGGTCCTCAGACGTACAACTACCCGTTTGTGAGAAGTATGTGGCCTGCCACTGCCAAAGCTGGAGCTGAACCAGTGATGATCAGTTATGACCAAAGCAGTCTGCTAAGTTCCTTTGCTAATGTGGAGTATCAGCAGGATAAGCAGCTTACTCTCTTTGGATCAAACAACTCTAAAGCAGGCCATGGCAATGAAGCAGTGTCTGGAATTCCCCTGAGCCAAACAAGTTCTGGTGCCGTTGCCCCATCAGCAAGTGCAAATGGTGGCCGGAAGCTCGCTTCTGATTGCAAACCTGGATCTTTTGATTCAAATTGTGCTCTCTATCTTCTGTCAACACTTCAGACACAAAGTCAAGAGTTAAGCTTGGTGCAGTCCACATTAAGCTGTCCAGGGCAATCTGACCCATTGGAAGATTTTCATTTTGATGCTGGGGACAAGTACTCATCATGCTCAGAAAGTCCACAAGAAAAGTCCACTAATCCATTATTGGTTGTGGATGCCGACACAGCCAACCTTCATTGCGGCCATATGATGCACACGAGGCCTGAGGAAAGTGTGGAAAATGGGGACTTGGCGACCTTTCCATTTTTCTGGGAGTAG 1110 0.4937 MDWGWKELAWDPSRSELSNGAASVDLSLGETSDFTQKSSSYTPKDLPRDSKSASSATKRSRTLNGSMQSVSCLVDGCDSDLSDCREYHRRHRVCEKHSKTPNVLVGGKQQRFCQQCSRFHSLGEFDGVKRSCRKRLDGHNRRRRKPQPPSLFMAAEKFLSGFKGPRILHFGGPQTYNYPFVRSMWPATAKAGAEPVMISYDQSSLLSSFANVEYQQDKQLTLFGSNNSKAGHGNEAVSGIPLSQTSSGAVAPSASANGGRKLASDCKPGSFDSNCALYLLSTLQTQSQELSLVQSTLSCPGQSDPLEDFHFDAGDKYSSCSESPQEKSTNPLLVVDADTANLHCGHMMHTRPEESVENGDLATFPFFWE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0620 369 SUPERFAMILY SBT domain 70 151 IPR036893 GO:0003677|GO:0005634
Lele07g0620 369 Pfam SBP domain 72 145 IPR004333 GO:0003677
Lele07g0620 369 FunFam Squamosa promoter-binding-like protein 14 63 133 - -
Lele07g0620 369 ProSiteProfiles Zinc finger SBP-type profile. 69 146 IPR004333 GO:0003677
Lele07g0620 369 MobiDBLite consensus disorder prediction 28 62 - -
Lele07g0620 369 Gene3D - 63 133 IPR036893 GO:0003677|GO:0005634
Lele07g0620 369 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 19 304 IPR044817 GO:0003677
Lele07g0620 369 MobiDBLite consensus disorder prediction 28 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0620 Lele-ChrLele07 3530240 3532018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0620 65 172 SBP-box Gene Family AT5G50670 65.741 3.05e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele07g0620 SBP 1e-30 No_clan