Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0612 ATGGAAGTAGAGCAGAATCTAGAATCAGGGTTCCCGTACTGGAACTGTTTCCGTCGCCGTTTCGGCCCGGACTCTCCTTTCTTTGCGCCCGGTAACATCGAACGGGAACTTCTTGCCAAACAGATTGCCCTGGAGTTAACTGCGGAAGAGAAACAACAGCTTTTAGTACAAGATGAATACAGTAAAGTCTTCTGTCCCATTGCTGGTTGTGGAGCACGCTTGCCTTCCTTGGAGGAATTCGAGAATCATTATAATGCACGGCACACTGCTTCTTGTTCAGTGTGTTCTAGAGTCTACCCAACATCTCGCCTGCTAAGCATACATATTTCTGAAGTGCATGATTCATTCTTTCAAGCAAAGGCTGCACGTGGCTATGATGTGTATGAGTGCTTAGTGGAATGCTGTGGTTTAAAGTTTAAATGCTACAAGAGTAGGCATCAACACCTCATTGACAAGCATAAGTTCCCCACTTCATTTGAGTTTTTAAAGAAGGCTCGATCATCAAAGAAACAAAGGCAGAAGGTTCAACGGAAACGAGGTACACACAAGGAGAATGATTCAAGAACAATGGAAGTGGATAATGCAACCATGGATGGCCTTGTAGCGGCAGTCTCTAAATTAAGTACTTCTGACTCAACCCCATCATCTGTCAGCTTCGGTCACCGGCACACTCGTGGTTTGACATTTGTCCCTAGAGCTGTTCAGCGTGAAGTTGGATCAAACTCTGCATCACCTAGAAGAAAACAATAA 750 0.448 MEVEQNLESGFPYWNCFRRRFGPDSPFFAPGNIERELLAKQIALELTAEEKQQLLVQDEYSKVFCPIAGCGARLPSLEEFENHYNARHTASCSVCSRVYPTSRLLSIHISEVHDSFFQAKAARGYDVYECLVECCGLKFKCYKSRHQHLIDKHKFPTSFEFLKKARSSKKQRQKVQRKRGTHKENDSRTMEVDNATMDGLVAAVSKLSTSDSTPSSVSFGHRHTRGLTFVPRAVQREVGSNSASPRRKQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0612 249 SMART c2h2final6 63 88 IPR013087 -
Lele07g0612 249 SMART c2h2final6 90 113 IPR013087 -
Lele07g0612 249 SMART c2h2final6 128 153 IPR013087 -
Lele07g0612 249 MobiDBLite consensus disorder prediction 166 190 - -
Lele07g0612 249 PANTHER UNCHARACTERIZED 8 237 IPR039258 -
Lele07g0612 249 MobiDBLite consensus disorder prediction 209 249 - -
Lele07g0612 249 ProSitePatterns Zinc finger C2H2 type domain signature. 92 113 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0612 Lele-ChrLele07 3503060 3505109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0612 1 244 C2H2 Transcription Factor Family AT5G14140 64.961 9.55e-117 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele07g0612 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0612 07 3503060 3505109 Lele07g0612 07 3503060 3505109 ECH
Lele05g0586 05 3445560 3447593 Lele07g0612 07 3503060 3505109 hybridization
Lele06g0407 06 2484575 2489177 Lele07g0612 07 3503060 3505109 hybridization