Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0596 ATGGATAAAGCGACGCAGTATGGGCGTGTGTTTGAGCACTTTGACGGAGACAGAGACGGGAGGATATCGGCCAAGGAGCTGCGGCAATGTGTGGAGGCGATAGGCAGGGAGTTGACGGAGGAGGAGGAGGCGGCGGAATACTTGGACGCCGATGGAGATGGGCTGGTGGGGTTTGAGGACTTTGTGACGTTTGTGGAGGGAGGGAAAGAGGAAGAGAAAGTGAGGGACTTGAAAGAAGCGTTTAAGATGTATGAAATGGAGGGAAGTGGGTGTATAACGCCAAAGAGTTTGAGCAGAATGCTTGGCAGATTAGGTCAATCCAAAAGTGCAGATGAATGTCAAGTCATGATCTCTAGATTCGATCTCAACGGTGATGGCGTCCTCACTTTCGATGAATTTAAGGTCATGATGCTGTAA 417 0.4988 MDKATQYGRVFEHFDGDRDGRISAKELRQCVEAIGRELTEEEEAAEYLDADGDGLVGFEDFVTFVEGGKEEEKVRDLKEAFKMYEMEGSGCITPKSLSRMLGRLGQSKSADECQVMISRFDLNGDGVLTFDEFKVMML 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0596 138 ProSitePatterns EF-hand calcium-binding domain. 15 27 IPR018247 -
Lele07g0596 138 ProSiteProfiles EF-hand calcium-binding domain profile. 108 138 IPR002048 GO:0005509
Lele07g0596 138 ProSiteProfiles EF-hand calcium-binding domain profile. 42 71 IPR002048 GO:0005509
Lele07g0596 138 ProSiteProfiles EF-hand calcium-binding domain profile. 2 37 IPR002048 GO:0005509
Lele07g0596 138 SMART efh_1 40 68 IPR002048 GO:0005509
Lele07g0596 138 SMART efh_1 6 34 IPR002048 GO:0005509
Lele07g0596 138 SMART efh_1 112 138 IPR002048 GO:0005509
Lele07g0596 138 SMART efh_1 76 104 IPR002048 GO:0005509
Lele07g0596 138 ProSitePatterns EF-hand calcium-binding domain. 49 61 IPR018247 -
Lele07g0596 138 SUPERFAMILY EF-hand 6 137 IPR011992 -
Lele07g0596 138 Pfam EF-hand domain pair 9 65 IPR002048 GO:0005509
Lele07g0596 138 CDD EFh 76 137 IPR002048 GO:0005509
Lele07g0596 138 ProSiteProfiles EF-hand calcium-binding domain profile. 72 107 IPR002048 GO:0005509
Lele07g0596 138 ProSitePatterns EF-hand calcium-binding domain. 121 133 IPR018247 -
Lele07g0596 138 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 76 137 - -
Lele07g0596 138 FunFam Calcium-binding protein CML38 68 138 - -
Lele07g0596 138 Gene3D - 69 138 - -
Lele07g0596 138 Gene3D - 1 68 - -
Lele07g0596 138 Pfam EF-hand domain pair 89 137 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0596 Lele-ChrLele07 3401805 3402221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0596 2 137 EF-hand Containing Proteins AT1G76650 49.275 3.65e-42 136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0596 07 3401805 3402221 Lele13g1228 13 22626901 22632351 CCT
Lele07g0596 07 3401805 3402221 Lele14g1124 14 20954694 20960018 CCT
Lele07g0596 07 3401805 3402221 Lele15g1231 15 7126563 7132026 CCT
Lele07g0596 07 3401805 3402221 Lele16g1263 16 7148864 7154995 CCT
Lele07g0596 07 3401805 3402221 Lele07g0596 07 3401805 3402221 ECH