Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0594 ATGGTTCTAGGCTTGAGAGGAAAGAACAGGAGACGTGCCACTGTTCAAATTGATTACCTCGTTCATATACAGGAGATCAAACCTTGGCCCCCTACTCAATCCCTCAGATCCCTTCGTTCTGTATTAATTCAATGGGGAAATGGTGAACGCAGTTCAGGTTCTACCAATCCTGTTGTGCCCTCTCTTGGTTCTGTTATCGGTGAAGGAAAAATTGAATTCAATGAGTCATTTAATCTTCCTGTTACTCTGTTGAAGGATATGTCTGTAAGAGGTGGTAATGCTGATGTATTCCAAAAGAATTGTTTGGAGTTCAACTTGTATGAGCCTCGAAGAGATAAGGCCGTTAAAGGTCAGTTATTGGGAACTGCTGTCATAGATTTGGCAGATTATGGTATGCTCAAAGAGGCGTTGAGCGTTAATGCTCCATTGAACTGCAAGAGAAACTACAGAAACACAGATCAGCCACTTTTGTTTATTAAAATTCAGCCTATGGAAAAGGATCACAATAGCTCCTCTTTAAAGGATATGTCTTCAAAAGCTGTGTCAAAGGAAAATAGTGTTGGTGACTCTGTTTCAAAATTGATGAATGAAGAATACACTGAGGAGGCTGAGATTGCCTCTTTTACTGATGACGATATTTCCTCACATTCATCTGTGGCTGCAGTTACTTCTGCTCTTGAGTCGAACTCAAATGGAAATATAACTCCTGAACTTCAAGAGAATGGATCTGCTTCAAGCACAGGTATGAATGATAAGAAGCATCCACTGGCTTCAGAAACAAGGATTGAAAAATTGAATATAATACCACAAGATACATATAAGAAACTGGAGAGGAATTCACCATACACATCATCAGATGTATCATCTGATCCTGGAAGTCCACTAAATGGTCAAACTTCTATTAGTTCGCATCATAGTTCAGTGACATCCCAAAAGCATGTTGTCTCCTCAATCATTCATCGTTCTTCCCCATCTTTAGCACTTGACAATTTAGATGAAAATCCTAAGACCAAGACTGACAGCAGTTACTACGAACATTTGAATCAGGATGTTCAAATAAATGCTGATACAAGTAGAACTATAACTACAGATCCTCAATTAAACCGCAATGAATACACTTCTCATGGTTATCCTAGCAGCACAGCATCTCCAGATAGTAATCACTATGTGGGAAAGAATCCTGGCACTGCAAAAAAGGATGGTGCTGAAATCAACGACAAACTTTATAAGGGACGTGGGGAAGCTGAAAATTATCATGTGGAAGGCATAAGTGATCAATTTTACTGTAGTACTGTTGATGATAAACATGGAGAGGAAATTTCTAATTTGTATAAGCAATACCATGTAACAGATGAACAATCTTTAACTGAAGGTGTTGAAGATCAAATCCCATTGAGTACAAGCGCATATACTTTAGATGGGACAAATATTGGTTCGAAAGGAAATAGTCTGAAAAGTGAAAGATTAAAGCATGTAAAGTCTGTAAGGTCACCTACAGACTCAACATTGAGTACTGGATCACCTGACAATCATCATGCTGAAGTAAAGGATGCTGGCATGGCTGGAGATGTGCAAAATAATGGAGGGAATATCAGAGTCAGTGACAAAAAAGATGCCAAGTTTTTTCCAAAGGAAGCAAGGAGTTCAATTTCAGACAGAAAAATCAATCTTTTGGAAAGCAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCGGCTATAGAGGTTGCTCTATATTCTGTAGTTGCTGAGCACGGAAGCTCCATCAGTAAGATATATGCCCCAGCTCGGCGCCTTTGTAGGCTGTATCTTCATGCTTGTAAAGAAAATCTTCAAGAAAGAAGGGCCGGGGCAGCTAAAAGTGCTGTTTCTGGACTAGTTCTTGTTGCAAAGGCGTGTGGAAATGATGTCCCAAGGTTGACATTTTGGTTGTCTAATTCTATTGTGTTAAGAACAACTATATGCCAGACCACCAAAAAAGTGGCGCCTGCTGGACCAAGCGTAAAAAGGAAAATTGGGAGAGAGGGGAGTGATAACATAACTCCCTCATTGCGATGGAAGGGATACTCTCCCAGAAAAAATGAAAATACCACTGTTGTGCAAGGAGGTATCGATAACTGGGATGACCCCCTTGCATTCACATCAGCACTGGAAAAGGTAGAAGCTTGGATCTTCTCTCGCATTGTTGAATCTATATGGTGGCTGACTATGACTCCACACATGCATCATGTTGATGCAAAAGTCACCAAGAAGGATGTGGGCTCTTCCTCATGGAAAACCTTCCGAAAGTTGTCTAGGTCATGTGATAATGAACAGGGGAAGTTTTCACAAGACATTTGGAAGAATGCTTTTAGGGAAGCCTATGAAAAGCTCTGTCCTATTCGAGCTGGAGGGCACGAGTGTGGCTGTTTGCCAGTGCTGTCCAGATTGATAATGGAGCAATGTGTGGCAAGATTAGATGTGGCTATGTTCAATGCAATTCTTCGTGAATCTGCTGAAGAAATCCCAACTGATCCTGTATCCGATCCAATTAGTGATCCCAAGGTTCTTCCAATACCCCTCGGAAAATCAAGCTTTGGAGCCGGTGTGCAGCTAAAAAGTGCGATTGGGAACTGGTCTAGATGGCTTACAGACCTATTTGGTATTGATGACGATGACTCGCTTCAAGACGACGATGACCCTGAATCAGCTGCTAATAATGATGGGAGACAAAATGTACCTTGCAAGTCCTTCCATCTTCTTAATGCACTAAGTGAACTCTTGATGCTTCCTAAGGATATGCTAGTGGGTACATCTGCCAGGAAAGAGGTATGCCCGATGTTTAGCACGCCAGTAATCAGGAGGGTTTTAAACAATTTTGCCCCAGATGAGTTTTGCCCTGATCCAATTCCAACTGCTCTTTTTGAAGCTCTGGATTCAGAGGATGATCTTGAGGATGGTGGAGAGTGCGTAAAAAACTTCCCATGCATTGCGACTCCCATAGGCTATATACCTCCCCCAGCATCTTCCATGGCAAGCATAATTGGAGAGGTTGGAAGCGAATCTAAGCTGAGAAGAAGTAGATCTTCGGTTCTCAGCAAGGCATACGCCAGCGATGATGAGCTCGATGAATTAAACTCTCCCCTATCTTTCATATGTAACGATGGTTTCATGTCTAAAGCACATGCTACGAAATCCAACTGCAAGTCCAAAGAAATTCAAAATTCATCCGCTGTCAGATATAAACTCCTCAAGGATGTATGGAAGAACGTCGAATAG 3261 0.4146 MVLGLRGKNRRRATVQIDYLVHIQEIKPWPPTQSLRSLRSVLIQWGNGERSSGSTNPVVPSLGSVIGEGKIEFNESFNLPVTLLKDMSVRGGNADVFQKNCLEFNLYEPRRDKAVKGQLLGTAVIDLADYGMLKEALSVNAPLNCKRNYRNTDQPLLFIKIQPMEKDHNSSSLKDMSSKAVSKENSVGDSVSKLMNEEYTEEAEIASFTDDDISSHSSVAAVTSALESNSNGNITPELQENGSASSTGMNDKKHPLASETRIEKLNIIPQDTYKKLERNSPYTSSDVSSDPGSPLNGQTSISSHHSSVTSQKHVVSSIIHRSSPSLALDNLDENPKTKTDSSYYEHLNQDVQINADTSRTITTDPQLNRNEYTSHGYPSSTASPDSNHYVGKNPGTAKKDGAEINDKLYKGRGEAENYHVEGISDQFYCSTVDDKHGEEISNLYKQYHVTDEQSLTEGVEDQIPLSTSAYTLDGTNIGSKGNSLKSERLKHVKSVRSPTDSTLSTGSPDNHHAEVKDAGMAGDVQNNGGNIRVSDKKDAKFFPKEARSSISDRKINLLESKIKMLEGELREAAAIEVALYSVVAEHGSSISKIYAPARRLCRLYLHACKENLQERRAGAAKSAVSGLVLVAKACGNDVPRLTFWLSNSIVLRTTICQTTKKVAPAGPSVKRKIGREGSDNITPSLRWKGYSPRKNENTTVVQGGIDNWDDPLAFTSALEKVEAWIFSRIVESIWWLTMTPHMHHVDAKVTKKDVGSSSWKTFRKLSRSCDNEQGKFSQDIWKNAFREAYEKLCPIRAGGHECGCLPVLSRLIMEQCVARLDVAMFNAILRESAEEIPTDPVSDPISDPKVLPIPLGKSSFGAGVQLKSAIGNWSRWLTDLFGIDDDDSLQDDDDPESAANNDGRQNVPCKSFHLLNALSELLMLPKDMLVGTSARKEVCPMFSTPVIRRVLNNFAPDEFCPDPIPTALFEALDSEDDLEDGGECVKNFPCIATPIGYIPPPASSMASIIGEVGSESKLRRSRSSVLSKAYASDDELDELNSPLSFICNDGFMSKAHATKSNCKSKEIQNSSAVRYKLLKDVWKNVE 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0594 1086 Coils Coil 555 575 - -
Lele07g0594 1086 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 15 135 IPR019448 -
Lele07g0594 1086 MobiDBLite consensus disorder prediction 276 317 - -
Lele07g0594 1086 MobiDBLite consensus disorder prediction 226 253 - -
Lele07g0594 1086 MobiDBLite consensus disorder prediction 349 388 - -
Lele07g0594 1086 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 550 1083 IPR021827 GO:0005643
Lele07g0594 1086 MobiDBLite consensus disorder prediction 226 317 - -
Lele07g0594 1086 MobiDBLite consensus disorder prediction 168 189 - -
Lele07g0594 1086 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
Lele07g0594 1086 MobiDBLite consensus disorder prediction 174 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0594 Lele-ChrLele07 3389728 3395274 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0594 07 3389728 3395274 Lele07g0594 07 3389728 3395274 ECH
Lele05g0567 05 3327971 3334711 Lele07g0594 07 3389728 3395274 hybridization
Lele06g0388 06 2379014 2390834 Lele07g0594 07 3389728 3395274 hybridization