Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0559 ATGACTTACGGGGGAGAGCCTGAGAATGAGGAGATTTATACGCTAAAATTTCATACATATAACACTTTGATGGACCTGAGCTCAACCAAAAATGATCCCAAGAGGAGAATCAATGCATCTAGAAGAAACCTGGGGTATTTATCTTGCGGAACTGGGAACCCCATTGATGACTGCTGGCGTTGTGACTCCAACTGGGAGAAAAACCGGCAAAGGCTAGCCGATTGCGCCATTGGGTTCGGTAAGGACGCCGTTGGAGGAAGAAACGGCCGAATCTACGTCGTCTCAGACTCTGGGGATGACGACCCGGTGAATCCCAAGCCAGGAAGTGCCGATCCTACCATTAACAGCGAAGGGAATAGGTTTCTTGCTCCTGATAATAGGGCTAGCAAAGAAGTGACGAAGCACGAGGATGCTCCTGAGAGCGAGTGGACGAACTGGAATTGGAGATCAGAAGGTGATCTTTTCTTGAACGGAGCATTCTTCAAGCAGTCTGGTGCTGCATCTTCTTCATCACCCTATGCTAGGGCTTCAAGTCTGAGTGCTAGGCCGTCTTCTCTGGTTGGTTCTATCACCGTCGGTGCCGGGGCACTTATCTGCAGAAAGGGCACTCGTTGCTGA 618 0.5 MTYGGEPENEEIYTLKFHTYNTLMDLSSTKNDPKRRINASRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCAIGFGKDAVGGRNGRIYVVSDSGDDDPVNPKPGSADPTINSEGNRFLAPDNRASKEVTKHEDAPESEWTNWNWRSEGDLFLNGAFFKQSGAASSSSPYARASSLSARPSSLVGSITVGAGALICRKGTRC 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0559 205 MobiDBLite consensus disorder prediction 127 142 - -
Lele07g0559 205 SUPERFAMILY Pectin lyase-like 108 198 IPR011050 -
Lele07g0559 205 MobiDBLite consensus disorder prediction 95 142 - -
Lele07g0559 205 SUPERFAMILY Pectin lyase-like 32 109 IPR011050 -
Lele07g0559 205 PRINTS Pollen allergen Amb family signature 75 92 IPR018082 -
Lele07g0559 205 PRINTS Pollen allergen Amb family signature 99 124 IPR018082 -
Lele07g0559 205 Gene3D - 52 109 IPR012334 -
Lele07g0559 205 Gene3D - 110 198 IPR012334 -
Lele07g0559 205 PANTHER PECTATE LYASE 18-RELATED 30 109 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0559 Lele-ChrLele07 3229188 3230826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0559 87 205 Polysaccharide Lyase AT4G24780 65.546 1.56e-37 132