Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0533 ATGGAGAAACAGGTCGTTGAAAACCTATGGAAGGGTGAGAGAGAAGCTCAGATTCAAGCAGCAATGGAGCTCACTAGATTAAGCAGCAAGCAGAGACACAAGTTAGCAGAAAATGGAATAATGGTTCCTCTGATTTCCATGCTCCATTCTCAAGACCATGAAGCTATTGAAGCTTCTCTCTGTGCTCTGCTCTGTCTTGCCTTTGGCAGTGAACGAAACAAGATTCGGATCGTCAAGTCTGGAGCTTTACCAGTGTTATTGAATCTCCTCCAATGCCAAAGCCAACCACTGATAGAACTAACAATAGCTGCTATGCTAACTCTTTCTTCTTGTAAAGCAAATAAGCTACCAATAGCTTCATCTGGGGCTATTCAATTACTGATACAAATTCTCAATGGCGATTATGAACATTGCATAAACATTCAATCCCAGCTTGACGCCATAGCCACACTCCATAACCTCTCAACCTGTAAAGAGATAACACCATTGCTAGTCTCTTCTGGTATAACAATGTCCTTACTTGAACTGATTCACAACTCAGGAAAATCAAGTGAGACAGCTGAGAAAGCAATTGGGTTGCTGGAAAACATTGTGTATTCATCAGAGAGAGCATTAAGCGAAGCTTCAAGCATAGGAGGGGCCATAAGGATAGCGGTTGAGACCATTGAAGAAGGTTCCATGGTAGGGAAAGAGCATGCTGTGGGGATTCTGCTTCTGATATGCAAAAGTTGCAGAGAGAAATACAGAGGAATGATACTGAGAGAAGGAGTCATGCCTGGTCTGCTTCAGTTAAGTGTGGATGGAACACAGAGAGCTAAAGGGATGGCTAGAGAATTATTGCTGCTTCTGAGGGATTGCTCTAATTATGGTTCAACAAGTGGGAAGAAGATGAATCATGAGATAATAGAACAGATAATGAAGGAGATTGATGAAGAAGGTGAGGAATTGGCTGGGAGTACTTTGAGATTGGTGGAGGAGATGATTGCCAAGCTCCATACATGA 1002 0.4251 MEKQVVENLWKGEREAQIQAAMELTRLSSKQRHKLAENGIMVPLISMLHSQDHEAIEASLCALLCLAFGSERNKIRIVKSGALPVLLNLLQCQSQPLIELTIAAMLTLSSCKANKLPIASSGAIQLLIQILNGDYEHCINIQSQLDAIATLHNLSTCKEITPLLVSSGITMSLLELIHNSGKSSETAEKAIGLLENIVYSSERALSEASSIGGAIRIAVETIEEGSMVGKEHAVGILLLICKSCREKYRGMILREGVMPGLLQLSVDGTQRAKGMARELLLLLRDCSNYGSTSGKKMNHEIIEQIMKEIDEEGEELAGSTLRLVEEMIAKLHT 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0533 333 Gene3D - 3 331 IPR011989 -
Lele07g0533 333 SUPERFAMILY ARM repeat 4 320 IPR016024 -
Lele07g0533 333 SMART arm_5 157 199 IPR000225 GO:0005515
Lele07g0533 333 SMART arm_5 28 68 IPR000225 GO:0005515
Lele07g0533 333 SMART arm_5 111 156 IPR000225 GO:0005515
Lele07g0533 333 SMART arm_5 70 110 IPR000225 GO:0005515
Lele07g0533 333 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 168 212 IPR000225 GO:0005515
Lele07g0533 333 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Lele07g0533 333 FunFam U-box domain-containing protein 4 3 201 - -
Lele07g0533 333 PANTHER U BOX DOMAIN-CONTAINING 4 286 - -
Lele07g0533 333 FunFam U-box domain-containing protein 4 205 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0533 Lele-ChrLele07 3078409 3079901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0533 4 285 U-box Gene Family AT3G54790 32.753 3.67e-26 107