LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g0504	ATGCAACCTCACTTCTCCCCTAAAACCGTCGATGTCCATGACAGAGCCACCGTGTTCCGCCCACTCTCGCTCGCCCCACCTCACATGCTTGCCTTCCATCTTGCATGGCTCAACCTCTTCTCTTGCTTCTTCTCAACCTTCGCCATCCCTCCCCTCCTCCCCGTCATCCGCCACCATCTCCACCTCACCCCCACTGACATTGGAAACGCCGGCATCGCCTCCTTCGTCGGCTCCATCTTCTCCCGCCTCCTCATGGGCCCCACCTGCGACCTCGTCGGTCCCCGCATAGCCTCTGGCACTCTCTCCCTCCTCACGGCACCTGTCATCCTCGCAACCGCTTTCGTGTCCACCGCTCAATCCTTCATCATCATTCGCTTCCTTGTCGGGTTCTCTCTGGCCAACTTCGTGTCGAGCCAGTTCTGGATGAGCTCCATGTTCTCCCCCTCCATAGTAGGCCTAGCAAACGGAGTTGCCGCCGGGTGGGCCAACGTGGGTTCGGGTGTGACCCAAATAGTGATGCCTCTGCTTTACTCTCTCATCATCCACTTCAACGTACCGTCTTCCATTGCTTGGAGGTTTGCGTTCGTTGTTCCTGCAATTTTCCAAGCAATCACGGGAATACTGGTGCTGGCTTTCGGGCAAGACCTGCCTTCGGGGAAGTACGTGCGTGCCCAGACCCAGGAGGCTAAAGGAGAGAACGTATTCAAAGTTATATTTGACGGCTTGTCCAATTACAGAGGCTGGGTTTTGGCTCTACTTTATGGGTTCTCTTTCGGGGTGGAACTAACTACAGACAACATCATGGCACAGTACTTTTATGATAGGTTTAACGTGAATATTGAAGTCGCGGGCGGTATTGCGGCGAGTTTCGGGATGGCGAATTTGTTCTCACGGCCGATGGGAGGAGTGTTCTCTGATGGCTTGGGAAGGAGGTTTGGCATGAGAGGCAGATTATGGGGTCTTTGGGTAGTTCAAACGGCGGCCGGACTTCTTTGTATTTTACTTGGACGTCTCAACTCTCTCTGGAGTTCTATCCTTGTCATATGCGCTTTCTCCGTATTTGTTCAAGCAGCTTCTGGCCTCATATTTGGTGTCGTCCCTTTCGTTTCCAACAGATCGCTAGGGGTAATTTCAGGGATGACGGGAAGCGGAGGGACTATTGGGGCCGTGGTGACTCAAACGCTGTTGTTTTCAGGGGCCCACTTCTCAAAGCAAACAAGCATATCTCTAATGGGAATTATGATGGTCTTGTGCACTCTTCCTGTGAGCCTTTTGTATTTCCCTCAATGGGGAGGTATGTTCTGTGGCCATTCATCAGATCCCGATTCTCCAGAAGAAAGTTATCGCCTGCTTGATTAG	1359	0.5269	MQPHFSPKTVDVHDRATVFRPLSLAPPHMLAFHLAWLNLFSCFFSTFAIPPLLPVIRHHLHLTPTDIGNAGIASFVGSIFSRLLMGPTCDLVGPRIASGTLSLLTAPVILATAFVSTAQSFIIIRFLVGFSLANFVSSQFWMSSMFSPSIVGLANGVAAGWANVGSGVTQIVMPLLYSLIIHFNVPSSIAWRFAFVVPAIFQAITGILVLAFGQDLPSGKYVRAQTQEAKGENVFKVIFDGLSNYRGWVLALLYGFSFGVELTTDNIMAQYFYDRFNVNIEVAGGIAASFGMANLFSRPMGGVFSDGLGRRFGMRGRLWGLWVVQTAAGLLCILLGRLNSLWSSILVICAFSVFVQAASGLIFGVVPFVSNRSLGVISGMTGSGGTIGAVVTQTLLFSGAHFSKQTSISLMGIMMVLCTLPVSLLYFPQWGGMFCGHSSDPDSPEESYRLLD	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g0504	452	ProSitePatterns	Sugar transport proteins signature 1.	301	316	IPR005829	GO:0016020\|GO:0022857\|GO:0055085
	Lele07g0504	452	Gene3D	MFS general substrate transporter like domains	28	223	IPR036259	-
	Lele07g0504	452	Pfam	Major Facilitator Superfamily	36	391	IPR011701	GO:0022857\|GO:0055085
	Lele07g0504	452	FunFam	Nitrate transporter 2.1	231	432	-	-
	Lele07g0504	452	PANTHER	HIGH-AFFINITY NITRATE TRANSPORTER 2.3	10	448	IPR044772	GO:0015112
	Lele07g0504	452	CDD	MFS_NRT2_like	32	424	IPR044772	GO:0015112
	Lele07g0504	452	FunFam	Probable high-affinity nitrate transporter 2.4	24	219	-	-
	Lele07g0504	452	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	31	424	IPR020846	GO:0022857
	Lele07g0504	452	Gene3D	MFS general substrate transporter like domains	232	430	IPR036259	-
	Lele07g0504	452	SUPERFAMILY	MFS general substrate transporter	20	426	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g0504	Lele-ChrLele07	2894231	2895964	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g0504	3	436	Inorganic Solute Cotransporters	AT5G14570	62.832	0.0	568