LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g0495	ATGGATTTTCAGCCAAACTTTCATGAGAGCTTTTCTCTGCTTTCTGGGCTTTTCCCGGAAAATCTCCCAAAGTCTCAGCCCCTATCACTCGCAATGTCACACATTCAACCTTCTCCTTCCCAGGTTAATCCGCCACTGATGTTCCCCACCGACCAAAATTTCCACCATTTTCAACACTACCCTCAGCTGGATCTGAACGGGTCAAACCCAAACCCAAACCCGATTTTTCTGAAGGATGCTCCATCTTCTTCCTTCAATATCCCTTTTTCTCACCCGACGACTCTCCCTTTCGATTCTTCCTTCCCAAACGAGCCCTTCAAAATCGACGCCGCCTTGCATGGTGGCCACAATACTGGTCGGGCCTTCTGGGATTTCTCCAACAAGCTCTCTCTTCCATCTGATTCTGTCTTGGCCCCACACATGGGCCCATCCCCGTCACCATTGTTCCATCAAGCTTATGGATCACCACTGAAGCCTAAGCTTCAGGACGAACTTTTTCTGTTTTTCCCTGAGAATAATAATCAGTGGGAACATGAAGCTCATGCTGATCACAGGGACGATGACAGGAACAAGAAGCTGCAGATGCGCAAAGGTGGTGGTATTCTGAAGAACACCAATATCATCAAAGGCCAATGGACACCAGAAGAGGACAGAATGTTGGTGCAATTGGTGGAGCGGTTTGGGATGAAAAAATGGTCGCAAGTCGCAAAGGCTTTGAATGGAAGGGTGGGAAAGCAGTGTAGGGAGAGGTGGCACAATCATCTGCGTCCGGACATTAGGAAGGAGGCATGGACGGAGGAAGAAGACATGATCCTGATCGAAGCCCACAAGGAAGTTGGCAACAAGTGGGCGGAAATCGCTCGGAGGCTACCCGGAAGAACGGAAAACACCATCAAGAACCACTGGAACGCCACAAAGCGTCGCCAGAACGCCAAGAGACACAGAAACAAGGGACCCACATCGACGCCTTCACTTCTTCAGGAATACATCAAGCGAGTCAGTTCAGGCCAAGGAACCTCAAGGCTGCCGCAGATCAAACAGGAACGAGCCTACGACGATGACGACGAAGACGACGAGCTGGTCTACTACAACAACAATCGCATGAACAACGTCAGAGTTCGCTACGAAAGCGCCTCGGACGACGACGATGGCACCAGCTCTGGGGATTGGGAGGTTGACATGTACGAGCCGTCGGAGGGAGACGCCGGCGCCGACGAGGATGATCAGGAGACGGCGTATGAGAATAATAATGGAGATGAAGAGGTTGCGGCAGAGATGAACGTGTTTGTTGGAGAGGAGGGGACGAAGAAAGAGATGGATCTGATGGAGATGATATGTGGTCCCAGCAGCAAGTACTGA	1359	0.5085	MDFQPNFHESFSLLSGLFPENLPKSQPLSLAMSHIQPSPSQVNPPLMFPTDQNFHHFQHYPQLDLNGSNPNPNPIFLKDAPSSSFNIPFSHPTTLPFDSSFPNEPFKIDAALHGGHNTGRAFWDFSNKLSLPSDSVLAPHMGPSPSPLFHQAYGSPLKPKLQDELFLFFPENNNQWEHEAHADHRDDDRNKKLQMRKGGGILKNTNIIKGQWTPEEDRMLVQLVERFGMKKWSQVAKALNGRVGKQCRERWHNHLRPDIRKEAWTEEEDMILIEAHKEVGNKWAEIARRLPGRTENTIKNHWNATKRRQNAKRHRNKGPTSTPSLLQEYIKRVSSGQGTSRLPQIKQERAYDDDDEDDELVYYNNNRMNNVRVRYESASDDDDGTSSGDWEVDMYEPSEGDAGADEDDQETAYENNNGDEEVAAEMNVFVGEEGTKKEMDLMEMICGPSSKY	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g0495	452	ProSiteProfiles	Myb-like domain profile.	204	255	IPR001005	-
	Lele07g0495	452	PANTHER	MYB PROTEIN-RELATED	180	325	-	-
	Lele07g0495	452	SMART	sant	208	257	IPR001005	-
	Lele07g0495	452	SMART	sant	260	308	IPR001005	-
	Lele07g0495	452	Gene3D	-	262	328	-	-
	Lele07g0495	452	ProSiteProfiles	Myb-like domain profile.	256	306	IPR001005	-
	Lele07g0495	452	MobiDBLite	consensus disorder prediction	302	357	-	-
	Lele07g0495	452	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	204	259	IPR017930	-
	Lele07g0495	452	MobiDBLite	consensus disorder prediction	382	415	-	-
	Lele07g0495	452	SUPERFAMILY	Homeodomain-like	206	302	IPR009057	-
	Lele07g0495	452	CDD	SANT	263	306	IPR001005	-
	Lele07g0495	452	Pfam	Myb-like DNA-binding domain	212	269	-	-
	Lele07g0495	452	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	260	310	IPR017930	-
	Lele07g0495	452	CDD	SANT	212	255	IPR001005	-
	Lele07g0495	452	Gene3D	-	208	260	-	-
	Lele07g0495	452	MobiDBLite	consensus disorder prediction	316	344	-	-
	Lele07g0495	452	FunFam	Transcriptional activator Myb isoform A	208	261	-	-
	Lele07g0495	452	FunFam	Transcription factor MYB119	262	326	-	-
	Lele07g0495	452	MobiDBLite	consensus disorder prediction	374	423	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g0495	Lele-ChrLele07	2831700	2833772	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g0495	203	336	MYB Transcription Factor Family	AT4G18770	69.630	2.36e-63	209

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Lele07g0495		Myb_DNA-bind_6	6.5e-19	CL0123