Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0494 ATGAATATCCTATTTGCTGTCTGGTATTGTGAAGTAAGACTTTGTCACCTGTGCAACACTTCTAGGGGAAGAAGCTTCTACTGGTGCGGCAGTGAACTGGATTTTAAAGGAGGAGACATGATTGGGAGTTTTGTAATGTATAAGGGTTTCGATCTGATTGGTTTTGATTTTGTCTTTTTTTGTTTGAATGATGTTGTTGAACCTGGTTTTATTCTTGTTGAATCTGAGCTTGGTTTGATTTATTGGTTGAATTTGATTTTGGATGGGGATAATTCTGGTTTGGAGAGTGACAATTATGACTGGAATACTGAAGATGAGTTAGAAATTGAAAATTTTCAATCTTCATCTTCAAATTTAACTGTTCCCAATGGAGAGGCTTTTTCTGGGTCTGGGGAAGCAAGCTCATCTCCAGGTTCTTCAAATTCCAAGATGTTCGATCACTTTGTTGGAATGGGATTTTCTGAAAAATTGGTTTCGAAAGTAATTCAGGAACATGGGGAAGAAAATGCAGATTTACTTCTTGAAACGCTTCTCACATTGTCGGCTTTGGATAGTTCTCCTCAAAACAACAAGGAAATTGAATCAGACTTTTGCTCTTCAGATGTTGAAGGGAGCTGCTCTCTTGATGATTGCTCAGATATAGATAGTTTCTCAGATGATGAGGAAAATACAAAACCTGTATCTGAGAACAATGGTAAATTGAAGACCTTGGTGAAGATGGGTTACAATGTTCAGGAGGCTTCAGTTGCCATGAAGAGATGCGGTGTGGACGCCTCACTCGCGGAGCTGACAGATTTTATATGCGCTGCTCAAATGGCCAAGGCTGCAGATGCCCTTATGGCCCCTGAAGAGAAGCCACAATACAGTAACCAAGCTAATAAGAAGAAGCGCAGTTATTATGAATGCGAGGTTTTGGGAAGGAAAAAGCCAAGGGATATTGTGAAGAAGACTTTAAACGAAGATGATGAGATGTTGCACCTTCCAAACCCAATGATAGGTTTTGGGGTTCCTACAGACGATTCATTCTCTATAAGCCAGAGAACACTTCCTGAGGCTGCCATTGGGCCTCCTTACTTCTACTATGAGAACGTTGCACTTGCACCTAAGGGTGTTTGGCAGACAATATCTAGGTTCTTGTACGACATTGAGCCTGAGTTTGTGGATTCGAAGCATTTCTGTGCAGCTGCCAGGAAAAGGGGCTATGTTCACAATCTCCCCATCCAAAACAGATTTCCTCTTCTTCCATTTCCAGCACGCACAATTCATGAGGCATTCCCCCTGACGAAGAAATGGTGGCCCTCTTGGGACCACAGGACCAAACTGAATTGTCTGCAAACAGCTTATGGCAGCGCAAAACTAACAGAGAGGATCAGGAAAGCTCTAGAAAACTATGAAGGGGATCCACCCCTGTCAGTCCAAAAGTATGTTCTTGATGAATGTCGTAAATGGAATCTAGTTTGGGTAGGAAGGAACAAGGTTGCCCCACTGGAGCCTGATGAGGTAGAAATGCTTTTGGGTTTCCCTAGGAATCACACTAGAGGAGGTGGAATTACTAGGAGTGACAGATATAAATCACTCGGCAATTCATTCCAGGTTGACACTGTGGCATACCACCTGTCAGTTCTTAAGGACTTGTACCCCAATGGCATCAATCTTCTGTCTCTGTTTTCTGGAATTGGTGGTGCAGAAGTGGCTCTTTATCGGCTTGGCATTCCTCTTAAGAATGTTGTTTCAGTTGAGAAATCAGAGGTAAATAGGAACATAGTCAGAAGCTGGTGGGAACAAACAAACCAGAAAGGAAATTTATATGACTTGGATGATGTACAGCTGCTAGATGGTGCTCGGTTGGAGTACTTTATGAGCCTTTTTGGGGGTTTTGATCTTATTATTGGTGGCAGTCCATGTAATAACCTAGCTGGTAGCAATAGGGTTAGCCGAGATGGTCTCGAGGGCAAAGAATCATCTCTTTTCTTTGATTACTGTCGCATTCTAGACTTGGTCAAAAATATGATGGCGAAAGGCCTGGCTAACCAGGTTACCGGGGCAACCGATGCTCAGTCCATTTCGGAATGGCGACGACTATTCATGTTTCTTAAGAAGACTCCCATGATTGGATTAGTCGTTTCTAGGCGGGACTATATTGCCAGTTCCCTTGCGATGGCTGCTACTGCAACCGCCTCTTCAGTGGGTCCAAGATATGCACCGCATGACCCAACCCTTCCTAAACCATGGCGGGGACTTGTTGATGGTAAGACCGGTTATCTCTACTTTTGGAATCCCGAGACTAATGTCACACAATACGAGAGGCCTACAAACTCAGCCCCCGTGCCGAAGTCTTCTTTAGTGCCTAGTTCTTCAGTCCAGGTATCACAAGGACCATGTCGGGACCACGGTCCTGATTTTAATGACAGGTATGGTAGAAGCAACGTTGGTGGATCAAATTCTGAAGCTGGATCTCGGAATCATCAGAATCCGAAAGGTGGGAGTCTTAGTTCTCATAATGTTCCAAATGGAATGCACATGACCGGAGATGTTTGTTCTTCTTTCAAAAGTCATGGATCATCAGATGCAGAAGTTGGATTAACCCCAGAGTCTTATCGGCGTTGCCATGAAATAACTGTTTCTGGAGATAGTGTCCCTCCACCTTTCACGTCATTTGGCTCTACTGGTTTTCCATCAGAGATTCTTAGAGAGGTACACAATGCTGGGTTCTCTGCCCCAACACCAATTCAGGCACAGTCATGGCCCATTGTTCTTCAAAGTAGAGATATAGTTGCCATTGCCAAAACAGGTTCTGGGAAAACCCTGGGATATTTAATTCCAGGATTCATCCATCTCAAACGTGTTGGTAATGACTCCAAATTGGGCCCCACTGTATTGGTACTGTCACCAACAAGGGAGCTGGCAACACAGATACAAGATGAAGCTGTGAAGTTTGCAAAATCATCGAGAATTTCTTGCGCTTGTTTGTATGGGGGAGCACCAAAGGGTCCTCAATTGAGAGACATCGACCGAGGAGCGGATATTGTGGTTGCTACACCTGGCCGCTTGAATGATATTCTTGAGATGAGGAGAATTAGTCTTCATCAGGTGTCTTACCTAGTACTTGATGAGGCTGACCGTATGCTAGATATGGGTTTTGAACCTCAAATCAGGAAGATTGTGAAGGAAGTGCCTGCACGACGGCAAACACTTATGTTTACTGCAACATGGCCCAAGGAGGTTAGGAAAATTGCAGCTGATCTGCTGGTCAATCCTGTTCAGGTCAACATTGGCAATGTTGACGAGCTTGTTGCTAATAAGTCCATTACACAGCATATAGAAGTATTGGCACCAATGGAGAAACACAGACGATTGGAGCAAATATTGCGGTCACAGGATCCAGGATCAAAAATTATTGTTTTTTGTTCTACCAAGAAGATGTGTGATCAACTTGCTCGTAATCTTACACGCCAGTTTGGGGCTGCTGCCATTCATGGGGATAAATCCCAGGCTGAGAGGGATCATGTGTTGAACCAATTTCGAACTGGGAGATCTCCTGTGCTTGTTGCAACAGATGTTGCAGCTCGAGGATTGGACATCAAAGATATTAGGGTTGTCGTCAATTATGACTTCCCTACTGGTGTGGAGGATTATGTTCATAGGATTGGAAGGACAGGGAGGGCAGGAGCCACTGGCTTGGCATACACCTTTTTTGGAGACCAGGATGCTAAACATGCTTCAGATCTGATCAAAATCTTGGAAGGTGCAAATCAGCGGGTCCCACCAGAACTCCGTGATTTGGCATCACGTGGTGGTGGGATGAACAGATCCAGGCGATGGGGTTCTGATGGTCGTGGGGGACGCAGCGATTCTGGATATGGGGCACGGGGTAGTGATTCTGGCTATGGGGGAAGGGGTGGGTGGGGAGCCACTCCTGGTGGCCGAGGTGGAAGTGGAGGCAGAGGCAGAGGCCGTGGATTTGACTATGATATGCAGAGGAATGATCGTACTTACTATGGACAAGATGCGGATACTCATGAGAAGTATGATAAAGGAAGAAGTCGTAGCAGGAGCCCTGATAGGAGTAGAAACTTGTGCCGTGATCGGAGCCGCAGTCGAAGTCCCAAGCATGAAAGGGCTGCACCACCTTCCCAAGGTTTTAGTTTTCACCACATAATGATGGAACGTAAAGGGGGCAGTGATCATGGCAAGAGCTTTGATCAAGGTAGAAACCGAAGTCGCAGCCCTGTTAAGAATGATAGGGCACCATCTGGCCGTGAACGTTCCCCAGGAGGATATAGTTTTCATCAAATGATGATGGAACGTCGTGAGGACAGAAGTTCAAGATTCAGTAGTGGTGGGTCAGACAGAAGTCCTTGTCAGGAGTGGGTAAGATCTCCCAGAAATAAGTTGGATGATGGGAGATGTGGCGGAGAAGAGGAGGAAGGGATGATTCCTGATGAAGGCAATGACCATGCTTCTTATGGTGTTGCGGATTAG 4482 0.4523 MNILFAVWYCEVRLCHLCNTSRGRSFYWCGSELDFKGGDMIGSFVMYKGFDLIGFDFVFFCLNDVVEPGFILVESELGLIYWLNLILDGDNSGLESDNYDWNTEDELEIENFQSSSSNLTVPNGEAFSGSGEASSSPGSSNSKMFDHFVGMGFSEKLVSKVIQEHGEENADLLLETLLTLSALDSSPQNNKEIESDFCSSDVEGSCSLDDCSDIDSFSDDEENTKPVSENNGKLKTLVKMGYNVQEASVAMKRCGVDASLAELTDFICAAQMAKAADALMAPEEKPQYSNQANKKKRSYYECEVLGRKKPRDIVKKTLNEDDEMLHLPNPMIGFGVPTDDSFSISQRTLPEAAIGPPYFYYENVALAPKGVWQTISRFLYDIEPEFVDSKHFCAAARKRGYVHNLPIQNRFPLLPFPARTIHEAFPLTKKWWPSWDHRTKLNCLQTAYGSAKLTERIRKALENYEGDPPLSVQKYVLDECRKWNLVWVGRNKVAPLEPDEVEMLLGFPRNHTRGGGITRSDRYKSLGNSFQVDTVAYHLSVLKDLYPNGINLLSLFSGIGGAEVALYRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLYDLDDVQLLDGARLEYFMSLFGGFDLIIGGSPCNNLAGSNRVSRDGLEGKESSLFFDYCRILDLVKNMMAKGLANQVTGATDAQSISEWRRLFMFLKKTPMIGLVVSRRDYIASSLAMAATATASSVGPRYAPHDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPTNSAPVPKSSLVPSSSVQVSQGPCRDHGPDFNDRYGRSNVGGSNSEAGSRNHQNPKGGSLSSHNVPNGMHMTGDVCSSFKSHGSSDAEVGLTPESYRRCHEITVSGDSVPPPFTSFGSTGFPSEILREVHNAGFSAPTPIQAQSWPIVLQSRDIVAIAKTGSGKTLGYLIPGFIHLKRVGNDSKLGPTVLVLSPTRELATQIQDEAVKFAKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMFTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLAPMEKHRRLEQILRSQDPGSKIIVFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQRVPPELRDLASRGGGMNRSRRWGSDGRGGRSDSGYGARGSDSGYGGRGGWGATPGGRGGSGGRGRGRGFDYDMQRNDRTYYGQDADTHEKYDKGRSRSRSPDRSRNLCRDRSRSRSPKHERAAPPSQGFSFHHIMMERKGGSDHGKSFDQGRNRSRSPVKNDRAPSGRERSPGGYSFHQMMMERREDRSSRFSSGGSDRSPCQEWVRSPRNKLDDGRCGGEEEEGMIPDEGNDHASYGVAD 1493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0494 1493 FunFam probable ATP-dependent RNA helicase DDX17 854 1092 - -
Lele07g0494 1493 MobiDBLite consensus disorder prediction 768 792 - -
Lele07g0494 1493 Pfam DEAD/DEAH box helicase 908 1078 IPR011545 GO:0003676|GO:0005524
Lele07g0494 1493 MobiDBLite consensus disorder prediction 1320 1372 - -
Lele07g0494 1493 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 1035 1043 IPR000629 -
Lele07g0494 1493 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1118 1262 IPR001650 -
Lele07g0494 1493 SMART ultradead3 903 1106 IPR014001 -
Lele07g0494 1493 SMART ww_5 739 772 IPR001202 GO:0005515
Lele07g0494 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 956 1239 IPR027417 -
Lele07g0494 1493 CDD SF2_C_DEAD 1103 1232 - -
Lele07g0494 1493 Pfam C-5 cytosine-specific DNA methylase 551 665 IPR001525 GO:0008168
Lele07g0494 1493 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 342 543 IPR029063 -
Lele07g0494 1493 ProSiteProfiles SAM-dependent methyltransferase DRM-type domain profile. 345 674 IPR030380 GO:0006306
Lele07g0494 1493 Gene3D Vaccinia Virus protein VP39 542 690 IPR029063 -
Lele07g0494 1493 Gene3D Vaccinia Virus protein VP39 341 431 IPR029063 -
Lele07g0494 1493 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 550 670 IPR029063 -
Lele07g0494 1493 MobiDBLite consensus disorder prediction 1388 1419 - -
Lele07g0494 1493 MobiDBLite consensus disorder prediction 113 139 - -
Lele07g0494 1493 ProSiteProfiles WW/rsp5/WWP domain profile. 738 772 IPR001202 GO:0005515
Lele07g0494 1493 Gene3D - 862 1093 IPR027417 -
Lele07g0494 1493 MobiDBLite consensus disorder prediction 1460 1476 - -
Lele07g0494 1493 PANTHER DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED 95 672 - -
Lele07g0494 1493 MobiDBLite consensus disorder prediction 768 843 - -
Lele07g0494 1493 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 884 912 IPR014014 GO:0003724
Lele07g0494 1493 Gene3D - 1094 1264 IPR027417 -
Lele07g0494 1493 MobiDBLite consensus disorder prediction 1256 1493 - -
Lele07g0494 1493 Pfam Helicase conserved C-terminal domain 1115 1223 IPR001650 -
Lele07g0494 1493 ProSitePatterns WW/rsp5/WWP domain signature. 744 770 IPR001202 GO:0005515
Lele07g0494 1493 CDD WW 741 771 IPR001202 GO:0005515
Lele07g0494 1493 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 915 1089 IPR014001 -
Lele07g0494 1493 FunFam ATP-dependent RNA helicase RhlB 1093 1265 - -
Lele07g0494 1493 MobiDBLite consensus disorder prediction 807 838 - -
Lele07g0494 1493 SMART helicmild6 1143 1223 IPR001650 -
Lele07g0494 1493 SUPERFAMILY WW domain 732 772 IPR036020 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0494 Lele-ChrLele07 2815916 2827086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0494 882 1261 Eukaryotic Initiation Factors Gene Family AT3G19760 33.506 6.75e-65 224