LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g0482	ATGGAGCATGTACCAGAAAAAAGATTTCCTCTCAATGCAAAAGATTATAAGTTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCACTGTGTATAGGGCACTCTGTGTGCCACTCAACAAAATAGTTGCCATCAAGGTTCTCGATCTCGAAAAGTGCAATAATGATCTGGATGGCATCAGGCGAGAGGTACAAACGATGAGCTTGATTGATCATCCAAATCTTTTACGGGCATATTGTTCTTTCACTGCTGGACACAACCTTTGGGTTGTGATGCCCTACATGTCTGGAGGATCCTGCCTTCATATAATGAAATCTGACTATCCTGAGGGATTTGAAGAGGCCGTTATTGCTACTTTGCTTCGGGAAGTTCTCAAAGCTCTTGTCTATCTTCATGCTCATGGACACATACATAGAGATGTAAAGGCTGGGAATATTTTGATTGATTCTGATGGTATGGTCAAATTAGCTGACTTTGGGGTGTCAGCATGTATGTTTGATGCTGGAGATAGGCAACGATCAAGAAATACTTTTGTTGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAACAATTACATGGATATAACTTCAAGGCAGACATTTGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCGATGAAAGTTTTGCTTATGACGTTACAAAATGCTCCTCCAGGCCTTGATTATGAAAGAGACAGGAGGTTTTCTAAGTCATTCAAAGAGATGGTAGCAACCTGCTTAGTGAAGGACCCAAAGAAACGGCCAACTTCAGAAAAACTTTTAAAACACCCTTTCTTCAAACATGCACGCCCCTATGAGTACCTAACTCGAACTATTCTAGATGGCCTTGCACCTTTAGGAGATCGATTTAGGATTTTGAAGGCAAAAGAGGCTGATTTATTGGTGCAGAATAAGGCTTTTTATGAGGATAAAGAACAACTATCTCAGAAAGAATATATTCAAGGAATCAGTGCCTGGAATTTCAACCTTGAGGATTTAAAAAGTCAAGCTGCTCTTATTCAAGATGATGACATGCTAAATGCAGAAGAGCCGGATATGGATAAGAAGCTAAAAAACAAATCTGATGATAATGGGGTTCCTGCAGAAGGGTCATTGGCAGTAACAACTAACGATTCAGATGCTAAACCCACATTGGATAAGGAGGATGGGTTCAGTGATCTTCAGCATTTGGAGAGTTCTCTTGCTTCATTTCCAATTAAACCTCTTGAAGCACTTAAAGGTTGTTTTGACATTTGCGAATATGATGCAAATACCAGGGATTTGGACCAGGATTATGGAAGAAACGAGAACGGAAGTTCTGGGCTTAGTTCAGTGCCACAAAATGCTTTAACTGAGCATAAAAAGTATTTGAGTGGTTCCTTGGTACCTGATAATGTTCTCTCCCCTAAAAAGGTTGTTACTGATGGGGACAGGGATTACTTGCAAGTGAAATATAATTCTGATCGGAATCATAGTGGTCCATTGTTATATCGTCAGAAGAGAGACACCAACAACAACCTTGCATCCGTTGGTGATGCGTCAGAAGGAGCAGTTATCCAGTGCAAAGGACGGTTTAAGGTTACTTCAGCAGATCTCAGTCCTAAGGGTCCTTCAAACTGCACTTTTGGCCTGGTTTCTGGAGGTTCTATTGGCCTACCAAATCAGAACTCTACAGTTGCTTCTATTCTTCCATCACTGCAGTTCATTTTGCAACAGAACAGCATGCAAAGGGAAGAAATTATTAAATTAATCAAGTATGTGGAACAATCTTGTGGGAAGAATACTGAATCAGCAGAGGCAGGGATAGTTGATATTTTGCAGGTACCACCTGCAACAAATAAGGAGAGAGAGCTGCGTGCGCAGGTGATTCAATTACAACAGAGTATTGGGAGTCTTGTTGAGGAAGTGCAAAGACGAAAAATGAAAAATGCCCAGTTAGAGAAGCAGTTGAACTCTATGGCCAACAGAGTGGAAGAGTGA	2013	0.4113	MEHVPEKRFPLNAKDYKLYEEVGEGVSATVYRALCVPLNKIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLRAYCSFTAGHNLWVVMPYMSGGSCLHIMKSDYPEGFEEAVIATLLREVLKALVYLHAHGHIHRDVKAGNILIDSDGMVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRRFSKSFKEMVATCLVKDPKKRPTSEKLLKHPFFKHARPYEYLTRTILDGLAPLGDRFRILKAKEADLLVQNKAFYEDKEQLSQKEYIQGISAWNFNLEDLKSQAALIQDDDMLNAEEPDMDKKLKNKSDDNGVPAEGSLAVTTNDSDAKPTLDKEDGFSDLQHLESSLASFPIKPLEALKGCFDICEYDANTRDLDQDYGRNENGSSGLSSVPQNALTEHKKYLSGSLVPDNVLSPKKVVTDGDRDYLQVKYNSDRNHSGPLLYRQKRDTNNNLASVGDASEGAVIQCKGRFKVTSADLSPKGPSNCTFGLVSGGSIGLPNQNSTVASILPSLQFILQQNSMQREEIIKLIKYVEQSCGKNTESAEAGIVDILQVPPATNKERELRAQVIQLQQSIGSLVEEVQRRKMKNAQLEKQLNSMANRVEE	670

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g0482	670	SUPERFAMILY	Protein kinase-like (PK-like)	13	300	IPR011009	-
	Lele07g0482	670	MobiDBLite	consensus disorder prediction	365	398	-	-
	Lele07g0482	670	Pfam	Protein kinase domain	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele07g0482	670	ProSitePatterns	Protein kinases ATP-binding region signature.	22	45	IPR017441	GO:0005524
	Lele07g0482	670	Gene3D	Transferase(Phosphotransferase) domain 1	97	293	-	-
	Lele07g0482	670	Gene3D	Phosphorylase Kinase; domain 1	5	92	-	-
	Lele07g0482	670	FunFam	serine/threonine-protein kinase BLUS1 isoform X1	97	330	-	-
	Lele07g0482	670	CDD	STKc_OSR1_SPAK	14	277	-	-
	Lele07g0482	670	SMART	serkin_6	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele07g0482	670	Coils	Coil	647	670	-	-
	Lele07g0482	670	FunFam	Serine/threonine-protein kinase BLUS1	5	93	-	-
	Lele07g0482	670	ProSiteProfiles	Protein kinase domain profile.	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele07g0482	670	PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	6	651	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g0482	Lele-ChrLele07	2726364	2734400	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g0482	1	667	MAP Kinase Kinase Kinase Kinase	AT5G14720	65.988	0.0	939

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Fray	Lele07g0482		Pkinase	9.5e-61	CL0016