Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0463 ATGGAGTCCGGCCATCTTTTCTTCGGTTCCTCCGCTTGCCGGGGGAACATGCTGTTTCTCGGGAACGGTGATCCAGTTTATAGAGGAGGATCGATCATAAGCATGGAGGAAAGCTCAAAGAAACGACCATCTTTCAGCTCACCTGAGGAACTGTTCGACGAGGAATATTACGATGAGCAGTTGCCGGAGAAGAAGCGACGCCTCACTCCCGAGCAGGTGCTTCTGCTGGAGAAAAGCTTTCAAGAAGAGAACAAGCTGGAGCTGGAACGGAAGACCCAGCTGGCCAAGAAGCTGGGATTGCAGCCAAGGCAGGTGTCTGTGTGGTTCCAGAACCGCAGGGCTCGTTGGAAAAGCAAGCAGCTTGAAAGGGATTACGATGTTCTCAAGTCTTCCTACGATGCCCTTCTTTCAAAGTACGACTCCATTGTCAATGACAATGAAAAGCTCACATCAGAGGTGGTAGCCTTAAACGAGAAGCTTCTAGCTAAAGAGATGCCACGAGAACCATTACCAGAGGAAAAAGCTGACCCGCTTATAATGGAACTAGCCCAAATGTCAACCCTGCCATTCAACGTGAAGGTGGAGGACCGACTCAGCAGTGGGAGTGGTGGGAGTGCGGTGGTGGACGAGGATGCTCCTCAGCTTGTTGTGGACAGCGTTGATTCCTACTTTCCAGCTGAGAACTTTGATGTATGCATCGCCAGAGTCGATAGGGCTCAGTCAGAGGAGGACGATGGTCGGAGTTACTTCTCTGATGTGTTTGTGGCCCCTCAACCTGAGCACCAAAACCATGAGGAGGGAGAGGCGTTGTATTGGTGGGCGTGGTCTTAA 831 0.5138 MESGHLFFGSSACRGNMLFLGNGDPVYRGGSIISMEESSKKRPSFSSPEELFDEEYYDEQLPEKKRRLTPEQVLLLEKSFQEENKLELERKTQLAKKLGLQPRQVSVWFQNRRARWKSKQLERDYDVLKSSYDALLSKYDSIVNDNEKLTSEVVALNEKLLAKEMPREPLPEEKADPLIMELAQMSTLPFNVKVEDRLSSGSGGSAVVDEDAPQLVVDSVDSYFPAENFDVCIARVDRAQSEEDDGRSYFSDVFVAPQPEHQNHEEGEALYWWAWS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0463 276 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Lele07g0463 276 SUPERFAMILY Homeodomain-like 56 121 IPR009057 -
Lele07g0463 276 Gene3D - 58 126 - -
Lele07g0463 276 Pfam Homeobox associated leucine zipper 119 160 IPR003106 GO:0006355|GO:0043565
Lele07g0463 276 CDD homeodomain 64 120 IPR001356 GO:0003677
Lele07g0463 276 PRINTS Lambda-repressor HTH signature 90 99 IPR000047 GO:0003677
Lele07g0463 276 PRINTS Lambda-repressor HTH signature 99 115 IPR000047 GO:0003677
Lele07g0463 276 SMART HOX_1 62 123 IPR001356 GO:0003677
Lele07g0463 276 FunFam homeobox-leucine zipper protein ATHB-6-like 67 113 - -
Lele07g0463 276 Coils Coil 118 159 - -
Lele07g0463 276 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
Lele07g0463 276 Pfam Homeodomain 64 117 IPR001356 GO:0003677
Lele07g0463 276 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 53 196 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0463 Lele-ChrLele07 2620733 2623036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0463 1 275 Homeobox Transcription Factor Family AT3G01470 60.000 8.84e-99 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele07g0463 Homeodomain 5.2e-18 CL0123