Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0453 ATGGACGATAAATCGAAAGAAAAAGAAGAATCCCGTGAGCAAAAGCGGGTTAGAGTTTCAATCAGTAAGACCAAGAGGAAATACCGAGGAGATCATGGAGGCTTAGAAGGCAAAACCAGACCTGTGGCTGGTCTAGAAGGTTATGGTTTCTTTCTCCTTAGGGAATCAAATGTCATGGCACAAAATGGAAATGTTTTTCAAAGGGGGACTCTGCAAGATCTTCGTTTTGGTTCACTCCCATCGGCTCATGTGGAAATGGGTGAAAATAGGAGAAAACTGGGACGAAAACCTAAAACCCAACCCAATGGAACCACCGTAGAAGAGAAACACTCCAACAACGTTACCGCAACAGCAAACGACCTCGTTTCAGTTCCCTCCGCCGTGGATTCCTCCCGCCGTCGACCCGACCGCCCCAAGAAGGTCAAGCTCAAGCAGGAGTCTCGGAGAAGTTCGAAACATGCGGAGCAGAATAAAGGAGTCGCAACCGCTTCTTCGGATTTGGTTGCCGAAGCACCATGGTTACCTAAGTGGGACAGCGACGTGCAGGCAGTACCTAAGTGGGACAGCGACGTCAAGCTCAAGAAGAGAGGCTCCGATACAAAATACATAGCAACGGTGATGGCCATTGGAACAGAGTGCGACCTAGCATTGTTGACGGTGAATGATGATGAGTTCTGGGATGGAGTTTCACCTGTGGGGTTTGGGGATTTGCCTGCACTGCAAGATGCTGTTACTGTTGTGGGCTATCCAATTGGAGGTGACACCATGTCTGTCACTAGCGGTGTTATAGATGCTGCAATTAATTCAGGAAATTCTGGGGGACCTGCTTTCAGTGATAAGGGAAAATGCGTGAGGATTGCATTTCAGTCTCTTAAACATGAAGATGCAGAGAATATAGGATATGTGATACCCACTCCCGTTATCATACATTTCATCCAAGATTATGAAAAGAATGGGGAATATACAGGGTTTCCAATTCTTGGCGTTGAGTGGCAGAAGATGGAAAATCCTGATTTGCGAATGTCAATAGGAATGGGACCGGAACAGAAAGGTGTGCGTATTAGAAGAATTAGGCCCACAGCTCCTGAATCTCATTTTCTGAAGCCATCTGATGTCATTCTTAACTTCGATGCGATTAATATTGCCAATGACGGAACAGTTCCATTCAGGCATGGGCAGAGCATTGGTTTCACTTACCTCGTCTCTCAAAAATACAATGGGGATACAGCTACAGTCAAGGTTCTCCGTGATTCAAAGAAACTTGAATTTAAGATAAACCATGCAACTCATAAGCGGCTTATCCCAGCCCACATCAAAGGCAGACCTCCTTCTTATTACATTGTGGCTGGATTTGTTTTTGCTGCAGTTTCTGTCCCATATCTTCGTTCTGAGACCGCCGCGTGCCGCCGTTCCGCCATCGAAGGCAAAACCAGGCTTAGTCAGGAGGAACATGAGCTTTCAGATTCGGCGAAAGAAACCGAGCAAATGGGCGTTGCGAACCGTTTCTCCCTTTTCATGCCCCATCGATTTCAGTTCCCTGAGGTTTTGAGAAAGCGCAGCAGTGGTGAGAACATAGCTTTTAAGAGCATGTTTCATGGGTCTCTCTTTATGATCTGTGGGATGTCAGAAAGCATGTATCATAAGTGGTTTTTTAAGCATACCCACTTGAAGATATCTTGGGTTCATCATCAAATCCAGCAAAAAGATGGTTACTTGAGCTACCCACCTCCTGTTTTGCCTTCATCTTCGCCCCCATATTCCGTTGCGTTCCACAAAGAAACAGGATCTTCTTCTTCCTCGTCTGGTACCAGAATTAGTCCGGCTGTTCTTTTTATTATAGTGATTCTAGCGGTGCTCTTTTTCATTTCTGGTCTTCTACACCTGCTTGTTAGATTTCTCATAAAGCGCCCATCTTCCTCAGCATCTGAATCTAACAGACACCAAGAAATCTCAACCTCCGATGCTCTTCAAAGACAGCTCCAACAGCTCTTCAATCTTCATGACTCTGGTCTTGATCAAGCTTTCATTGACGCACTTCCTGTTTTCCAGTATAAAGAGATTGTTGGTCTGAAAGAACCATTTGACTGTGCTGTGTGCCTCTGTGAGTTTTCAGAGAAAGACAAGCTCAGGCTGCTTCCAATGTGCAGTCATGCCTTTCATATTAACTGTATAGACACATGGCTCCTTTCCAATTCCACATGTCCACTTTGCAGAGGAACCCTCTTAACTCCAGGGTTCTCAATTGAAAACCCCATATATGACTTTGATGATTTAAGGGAAGATGATGGATGTAACGGTGTAAATGGGTTCACAACTTTTAGACAGAAAACTGTTGAGATTGAAGAAACTGTAGTAGAGAAAGGAGTGTTGCCTGTAAAACTTGGTAAATTCAGAAGGCTGAATGATGAGGCAGGGGAGAGTGGAGGAGGAGGAGAGACGAGTAGCAGTAATTTAGATGCAAGAAGATGTTACTCAATGGGATCTTACCAGTATGTGTTATCCAATTCAGACCTCCTCCGAATTGCCTTAAACCATGATGACCGTCAAGGCCACGAGGTAAGACTCACGAAAGGGGCAGAACAATCTGAGAAGTTTTCCATGGAGGAAGCAAAGAAGATTACAAGTGTGAGTAAAGGTGAGAGCTATTCTGTTTCCAAGATCTGGCAATGGTCCAAGAAGGGCAAATTTTCTACTTTGTCCGAAGAAGATCAAGTGGGCATGCCATCTTCTCTTAATACGGACCTTCCATGGATGAGAAGGACAGAAGGGACATGA 2775 0.4497 MDDKSKEKEESREQKRVRVSISKTKRKYRGDHGGLEGKTRPVAGLEGYGFFLLRESNVMAQNGNVFQRGTLQDLRFGSLPSAHVEMGENRRKLGRKPKTQPNGTTVEEKHSNNVTATANDLVSVPSAVDSSRRRPDRPKKVKLKQESRRSSKHAEQNKGVATASSDLVAEAPWLPKWDSDVQAVPKWDSDVKLKKRGSDTKYIATVMAIGTECDLALLTVNDDEFWDGVSPVGFGDLPALQDAVTVVGYPIGGDTMSVTSGVIDAAINSGNSGGPAFSDKGKCVRIAFQSLKHEDAENIGYVIPTPVIIHFIQDYEKNGEYTGFPILGVEWQKMENPDLRMSIGMGPEQKGVRIRRIRPTAPESHFLKPSDVILNFDAINIANDGTVPFRHGQSIGFTYLVSQKYNGDTATVKVLRDSKKLEFKINHATHKRLIPAHIKGRPPSYYIVAGFVFAAVSVPYLRSETAACRRSAIEGKTRLSQEEHELSDSAKETEQMGVANRFSLFMPHRFQFPEVLRKRSSGENIAFKSMFHGSLFMICGMSESMYHKWFFKHTHLKISWVHHQIQQKDGYLSYPPPVLPSSSPPYSVAFHKETGSSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKRPSSSASESNRHQEISTSDALQRQLQQLFNLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRGTLLTPGFSIENPIYDFDDLREDDGCNGVNGFTTFRQKTVEIEETVVEKGVLPVKLGKFRRLNDEAGESGGGGETSSSNLDARRCYSMGSYQYVLSNSDLLRIALNHDDRQGHEVRLTKGAEQSEKFSMEEAKKITSVSKGESYSVSKIWQWSKKGKFSTLSEEDQVGMPSSLNTDLPWMRRTEGT 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0453 924 PANTHER - 263 467 - -
Lele07g0453 924 ProSiteProfiles Zinc finger RING-type profile. 696 738 IPR001841 -
Lele07g0453 924 SMART ring_2 696 737 IPR001841 -
Lele07g0453 924 MobiDBLite consensus disorder prediction 85 111 - -
Lele07g0453 924 CDD RING-H2_PA-TM-RING 695 738 - -
Lele07g0453 924 SUPERFAMILY RING/U-box 675 744 - -
Lele07g0453 924 MobiDBLite consensus disorder prediction 130 155 - -
Lele07g0453 924 Pfam PDZ domain 434 472 IPR041517 -
Lele07g0453 924 Gene3D - 179 316 - -
Lele07g0453 924 MobiDBLite consensus disorder prediction 902 917 - -
Lele07g0453 924 SUPERFAMILY Trypsin-like serine proteases 196 320 IPR009003 -
Lele07g0453 924 Pfam Ring finger domain 695 738 IPR001841 -
Lele07g0453 924 Gene3D - 433 498 IPR046449 -
Lele07g0453 924 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 671 743 IPR013083 -
Lele07g0453 924 CDD PDZ_serine_protease 325 425 - -
Lele07g0453 924 MobiDBLite consensus disorder prediction 125 163 - -
Lele07g0453 924 Gene3D - 323 432 IPR036034 GO:0005515
Lele07g0453 924 MobiDBLite consensus disorder prediction 1 36 - -
Lele07g0453 924 FunFam RING-H2 finger protein ATL46 658 743 - -
Lele07g0453 924 MobiDBLite consensus disorder prediction 901 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0453 Lele-ChrLele07 2571795 2579057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0453 593 903 C3H Transcription Factor Family AT2G18650 41.477 2.49e-59 207