Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0441 ATGGAGTTTCTGGACTCTGCGAGTTTCGTGGTCAACGGATCCTTACAGAAAAACCGGGCTTCTCACAAAGCAACAGAAGCAGAGAAATTTAACGACGTCGTCGCTCCCGGCCGTAAATGGAAGATCTTCTACAGGTCATCGTCGGCCGTCCCTTCCAAACAATCGAAACATGGAAAGAAACAGCCCCCGGAAGAATTTCTCTGTCCCATATTAGGGTCTCTCATGGCCGACCCCGTCATCGTCTCCTCAGGCCACACCTTCGAGCGAGTCTCCGTTCAAGCTTGTAAAAATTTAAAGTTCACACCACGCCTCTCCGATGGCTCCACCCCCGATTTTTCTACCCTAATTCCCAACCTTGCCCTTAAATCTGCCATTGCTAAATGGTGCCAGAACTCCGCCAACCTACTCCCCGAGCCGCCTGATGTAGCTTCTTCTGAGAAGTTTGTGCATAGACTGGTGATGACGAAGACCCAGAAGACAGATTCAAGTATCCAGAACACGCAGAAGGTAGTAATCATAGAGGAAGAGCTGATTCAGGGAATGAAGGAGAACCCACCTGTGAATTTTAATCACGCAGTGACCGAGGTGACTCAACGGCCAGCTCACCCTTACTGGAACTCAGAGGAATCGGCGGGTTCCTCTCCTGCATCTCCGCCTATGCAACTTTCAACTCGACCAAGCTGCTATTCTTCCGCCTCATCCTCAGAAATCGAAGTCATTATTCCTAGCTCACCTGAAGAAGAGAATATCTTGGCCAAGTTAAAAAGCTCACAGGTGTCCGAGATCGAAGAAGCCGTTGTTTCACTAAGAAAGCTCACGAAAACTAGAGAGGATACGAGGGCCCATCTCTGCAGTCCTCGGTTACTCTCCGTCGTTCGATCGTTGATCATGTCGAAGCACACTAATATTCAGGTGAATGCGGTCGCAGCTCTGGTGAACCTCTCCTTGGAGAAAGTGAACAAAGTAAAGATACTCCGGTCCGGAATCGTTCCTCCGTTGATTGACGTATTGAAGGGGGGATCCCCTAAGGTGCAGGAACACGCTTCCGGCGCACTCTTCAGCTTGGCCATTCACGACGATAACAAGACTGCAATCGGCGTGCTGGGTGCTCTACCGCCACTGCTCCACTTGCTTCAATCCGAGAACGGGCGAACGCAGAATGACTCGGCGCTCGCACTGTACCACCTCTCCCTCGTACAGAGCAACCGGACCAAGATGGTAAAACTCGGGTCGGTTCCGATCCTAATGAGCATGTTAAAGTCGGGTAAGATGAGGGGTCACGTGCTACTCATACTATGCAACTTGGCGTCTTGTGGGGACGGCCGGGCGACGATGTTGGATGCGCGGGCGGTGGATTGCTTGGTGGAGTTGCTAAGCGGTAGCGAGTTGGGTTCCGGGTCGACCCGGGAGAGCTGCGTGGCGGTGCTGTATGCCCTGAGTCACGGCGGGTTGAGGTTTAAAGCGGTGGCAAGGGCGGCGGGGGTGGTGGAGGTGTTGACGAAGGAGGAGAAGGTGGGAAGCGAGAGGGCGAGGGAGAAGGTGAAGAGGTTACTGGAGATGATGAGGGCGAAGGAGGAAGCCGAAGAGGACGAGGACGACGTCGACTGGGAGGCGCTTCTTGAGTCGGGTTTGAGTAGTCTGAGTCGGGCCTGTCATGAGTCGAGCGAGTGA 1671 0.5332 MEFLDSASFVVNGSLQKNRASHKATEAEKFNDVVAPGRKWKIFYRSSSAVPSKQSKHGKKQPPEEFLCPILGSLMADPVIVSSGHTFERVSVQACKNLKFTPRLSDGSTPDFSTLIPNLALKSAIAKWCQNSANLLPEPPDVASSEKFVHRLVMTKTQKTDSSIQNTQKVVIIEEELIQGMKENPPVNFNHAVTEVTQRPAHPYWNSEESAGSSPASPPMQLSTRPSCYSSASSSEIEVIIPSSPEEENILAKLKSSQVSEIEEAVVSLRKLTKTREDTRAHLCSPRLLSVVRSLIMSKHTNIQVNAVAALVNLSLEKVNKVKILRSGIVPPLIDVLKGGSPKVQEHASGALFSLAIHDDNKTAIGVLGALPPLLHLLQSENGRTQNDSALALYHLSLVQSNRTKMVKLGSVPILMSMLKSGKMRGHVLLILCNLASCGDGRATMLDARAVDCLVELLSGSELGSGSTRESCVAVLYALSHGGLRFKAVARAAGVVEVLTKEEKVGSERAREKVKRLLEMMRAKEEAEEDEDDVDWEALLESGLSSLSRACHESSE 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0441 556 SUPERFAMILY ARM repeat 248 518 IPR016024 -
Lele07g0441 556 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 328 365 IPR000225 GO:0005515
Lele07g0441 556 Pfam Armadillo/beta-catenin-like repeat 320 356 IPR000225 GO:0005515
Lele07g0441 556 Pfam Armadillo/beta-catenin-like repeat 359 397 IPR000225 GO:0005515
Lele07g0441 556 MobiDBLite consensus disorder prediction 204 228 - -
Lele07g0441 556 SMART arm_5 438 481 IPR000225 GO:0005515
Lele07g0441 556 SMART arm_5 317 357 IPR000225 GO:0005515
Lele07g0441 556 SMART arm_5 399 437 IPR000225 GO:0005515
Lele07g0441 556 SMART arm_5 276 316 IPR000225 GO:0005515
Lele07g0441 556 SMART arm_5 358 398 IPR000225 GO:0005515
Lele07g0441 556 Coils Coil 507 531 - -
Lele07g0441 556 ProSiteProfiles U-box domain profile. 61 135 IPR003613 GO:0004842|GO:0016567
Lele07g0441 556 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 136 IPR013083 -
Lele07g0441 556 SUPERFAMILY RING/U-box 54 138 - -
Lele07g0441 556 PANTHER U BOX DOMAIN-CONTAINING 30 522 - -
Lele07g0441 556 SMART Ubox_2 65 128 IPR003613 GO:0004842|GO:0016567
Lele07g0441 556 Pfam U-box domain 63 131 IPR003613 GO:0004842|GO:0016567
Lele07g0441 556 FunFam RING-type E3 ubiquitin transferase 245 521 - -
Lele07g0441 556 FunFam RING-type E3 ubiquitin transferase 43 134 - -
Lele07g0441 556 Gene3D - 246 523 IPR011989 -
Lele07g0441 556 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 369 411 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0441 Lele-ChrLele07 2489824 2491494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0441 59 550 U-box Gene Family AT5G40140 54.234 3.13e-175 504