Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0432 ATGCTCTTTCGCTATAATATGCTGGCACTGGTTGGAGGTGGCACCAATCCTCAATACCCTCCCAGCAAGGTGATGATCTGGGATGATCATCAAGGCAGGTGCATTGGTGAGCTTTCATTCCAATCAGCTGTTCGTAGTGTCCGGCTTCGACGAGACCGAATAATTGTAGTTGTGGAGCAGAAGATTTTTGTGTACAATTTCGCTGACTTTAAGTTACTTCATCAAATTGAGACCATTGCAAACCCGAAGGGACTCTGTGCAGTTTCGCAATTGGCTGATTCTATGATATTGGCGTGTCCCGGTTTGCATAAGGGTCAGATACGAGTTGAGCATTATGCCCAGGAAAAAACCACATTCATTTCGGCTCATGATTCAAGAATAGCTTGTTTTGCTCTTACACTTGAGGGGCAGTTACTCTCCACCGCCAGCACCAAGGGTACTTTAATTCGAATTTTTGATACAGCCGATGGCACGCAGCTTCAAGAAGTGGGTGAAACCTCTAAAGTAAGAAGGGGTGCAAATGTGGCAGAGGTCTATAGTTTGGCATTCTCTTCTACTGCTCAGTGGCTAGCAGTCTCGAGTGATAAGGGTACTGTCCATGTCTTCAGCCTTAAGGCTAACTCTAGTTCTCCTCAGCATGAAAAATCACAGACTACAACCGATTCTCATGCTGCCAGTACACCGTCTAGCTCACCCCTTGCATTAGTTAAATTTAGAGGAGTGTTACCCAAGTACTTTAATTCAGAGCGGTCACTTGCTCAGTTTCGCTTACATGAGGGCACTTGTTACACTGTCGCATTTGGTCAGCAAGAGAATACAGTCATAATTCTCGGCATGGATGGGAGGTTTTGGGGTAAATATTGTTATGTACTCTACATTCGTGAATTGGAGTTTCAAACTTTGGTAACATTTAATCTGAACAGCTTCAGCTTTGCTGGCGTTATAACAGGTTGCACATTTTCTAATGTCTTCCCTGAAATTGGCAACAGAGTAAAAATTGCCGTATCGGTTAACCCAAAGACGAAGGCCACTCAAAACAGTAACACAATCAATGTTCCTTCACCCTTTAAAGACGTCGACTTTGAGCTTGTTCCCGTCAATGTCTTCGCCGGAGAACACAAGCTCCCTCCTTTGCTCTCCAAGAACGCACAATCTAGAGCTATAACAGCGTATCTGGCTGAGAAATACAAAGAAACTGGAGCTGATCTGATAACGAAGAGTGACCCAAAGTTGGTTAGGATAACCCAACCAATCAGTGATCGCGGCAGCTTGGAGAAGCTGAAGAATGTGCTCGATGTGTACGAGGAGAAGCTGAGCAACACCAAGTACCTTGCTGTGGATTTCTTCAGCCTCGCAGCTCTAAACCACATCACCCACACTCACTATTTCACGAAGACGCATTGTGCTTATATGATCAATTATCGCCCACATGTGAAGGCCTGGTGGGAAGATATCTCTTCCAGGCCTTCTTTATTGTTTGACTTTTGGTCAGAGTTGAGAGAAACATGA 1509 0.4473 MLFRYNMLALVGGGTNPQYPPSKVMIWDDHQGRCIGELSFQSAVRSVRLRRDRIIVVVEQKIFVYNFADFKLLHQIETIANPKGLCAVSQLADSMILACPGLHKGQIRVEHYAQEKTTFISAHDSRIACFALTLEGQLLSTASTKGTLIRIFDTADGTQLQEVGETSKVRRGANVAEVYSLAFSSTAQWLAVSSDKGTVHVFSLKANSSSPQHEKSQTTTDSHAASTPSSSPLALVKFRGVLPKYFNSERSLAQFRLHEGTCYTVAFGQQENTVIILGMDGRFWGKYCYVLYIRELEFQTLVTFNLNSFSFAGVITGCTFSNVFPEIGNRVKIAVSVNPKTKATQNSNTINVPSPFKDVDFELVPVNVFAGEHKLPPLLSKNAQSRAITAYLAEKYKETGADLITKSDPKLVRITQPISDRGSLEKLKNVLDVYEEKLSNTKYLAVDFFSLAALNHITHTHYFTKTHCAYMINYRPHVKAWWEDISSRPSLLFDFWSELRET 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0432 502 Gene3D - 21 282 IPR015943 GO:0005515
Lele07g0432 502 SUPERFAMILY GST C-terminal domain-like 391 490 IPR036282 -
Lele07g0432 502 SUPERFAMILY WD40 repeat-like 23 282 IPR036322 GO:0005515
Lele07g0432 502 SMART WD40_4 113 153 IPR001680 GO:0005515
Lele07g0432 502 SMART WD40_4 31 66 IPR001680 GO:0005515
Lele07g0432 502 SMART WD40_4 165 203 IPR001680 GO:0005515
Lele07g0432 502 SMART WD40_4 248 285 IPR001680 GO:0005515
Lele07g0432 502 Coils Coil 424 444 - -
Lele07g0432 502 MobiDBLite consensus disorder prediction 208 230 - -
Lele07g0432 502 Pfam Glutathione S-transferase, C-terminal domain 424 489 IPR004046 -
Lele07g0432 502 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 1 284 - -
Lele07g0432 502 Gene3D - 415 492 - -
Lele07g0432 502 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 386 502 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0432 Lele-ChrLele07 2441826 2448093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0432 357 492 Glutathione S-transferase Gene Family AT3G62760 41.530 7.93e-36 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0432 07 2441826 2448093 Lele07g0432 07 2441826 2448093 ECH
Lele07g0432 07 2441826 2448093 Lele08g0236 08 1420013 1424164 ECH
Lele05g0413 05 2353622 2364403 Lele07g0432 07 2441826 2448093 hybridization
Lele06g0231 06 1400092 1406809 Lele07g0432 07 2441826 2448093 hybridization