Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0400 ATGACAATCATCCTCATTTGCCTTCACCAAGCTTACTCCTCCTTATGTCGTCGTGACGGGGGCACCGGACGTCTCTTCCCTCGAGTTTCCACTGCCAAGAGCCAGGGTATAGATCCTTCTCTTTTCAAGTACCTTCCCAACTTCGCTTACTCCTCCGCCACTCGCCCTCCGTTGAATGACCGTGTCATCTGCTTATCGGAGTTGGAAGAAGCCATTAGACTAAATGGAGAATATAACCGTAATGAAGAGAGGCTCCTTGAGCAGCGTATTGGTTCAGAAGATCCAATATCTTGCTCTGGGTTTGCATACTTTAGAAGATCCTCCTGCTGCTTTAAATCGAATCTTAATGGAAGGACAGACAGAACCAGTTCATTCACCATGGGAATCGATTTGAAAGCAGGAGGTAAGAGCAAAAAGACAAAGCGAACCGCTCCCAAATCTGATGATATTTACTCGAAGCTCCTTGTCAAGCTCTACCGGTTTCTTGTTAGGAGGACTGAGAGTAAGTTCAATGCGGTGATTCTGAAGCGGCTTTTCATGAGCAAAGTCAACAAGCCACCTTTCTCTCTCTCTCGGTTGATTCGTTTCATGAAGGGAAAGGAAGACAAGATCGCCGTAGTGGTTGGGGCTGTGACCGACGACATTCGTGTGTATCAAGTCCCAGCTTTGAAGGTGACTGCCCTTAGGTTCACTGAAACTGCGAGAGCTAGAATTGAGAAGGCTGGCGGAGAGTGCCTGACATTTGATCAGTTGGCTCTTAGAGCTCCTTTAGGCCAGAACACGGTCCTGCTCAGAGGTCCTAAGAATGCCCGTGAAGCTGTGAAGCACTTTGGGCCAGCTCCAGTGGAAGAGCGTAGTCTGGACAATTTTGTTTTGAGAAACAAGTTTACTAATTATGATGAACCTTTAAAAGGATTGGGGTTAGCATTTCACTTGACTGACTAG 945 0.4698 MTIILICLHQAYSSLCRRDGGTGRLFPRVSTAKSQGIDPSLFKYLPNFAYSSATRPPLNDRVICLSELEEAIRLNGEYNRNEERLLEQRIGSEDPISCSGFAYFRRSSCCFKSNLNGRTDRTSSFTMGIDLKAGGKSKKTKRTAPKSDDIYSKLLVKLYRFLVRRTESKFNAVILKRLFMSKVNKPPFSLSRLIRFMKGKEDKIAVVVGAVTDDIRVYQVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPVEERSLDNFVLRNKFTNYDEPLKGLGLAFHLTD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0400 314 Pfam Ribosomal protein 60S L18 and 50S L18e 128 297 IPR021131 -
Lele07g0400 314 Coils Coil 68 88 - -
Lele07g0400 314 Gene3D - 127 301 - -
Lele07g0400 314 FunFam 60S ribosomal protein L18 127 302 - -
Lele07g0400 314 PANTHER 60S RIBOSOMAL PROTEIN L18 127 295 IPR000039 GO:0003735|GO:0005840|GO:0006412
Lele07g0400 314 SUPERFAMILY Ribosomal proteins L15p and L18e 147 265 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0400 Lele-ChrLele07 2259275 2263011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0400 129 281 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 80.519 8.66e-83 246