Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0399 ATGGATGTGGATACAGACAGTCACAATAATAAGTGTGCCCATAATGGTAAGGTCCTGCTTGGCTCTGCTACTCTTCTCTTCCTCATATTTATCCTCATCATCTTCCTTCACACCTACTCTTACTCCTGCTTCCGTCGGCGCCACCCACAACGCCGTCACCGCCACAATCGACCTCTCTTCCCGAATTCTACCGCCGACCCTCACACCGCCCTTGAACCTTCTCTTTTCAAGTTCCTCCCCACCTTCACCTACTCCTCCGCCACTCACCTCCACCTCCAGGAATGCGCCGTCTGCTTGTCGGAGTTCGAAGAAGACGAGGTTGGTCGCGTCCTCCCAAACTGCAATCACTGTTTCCATACCCATTGTATTGATACATGGTTCCGATCTCACTCCAACTGCCCAATATGCCGAGCTCTGGTTCAGCCGCCAAAAATCTCGTCGCAAAAAGTAGAGGCGGCTGTTTCCGATGGAGAGTTTGCGGGTTGCTCGTATCTTCCACCGCCGACTTCGTGCCCGAGGAAGGAGTTGGATTTTGATGTGCTGAGCATGATCGTGGAGGCGAGTAAGGAAGAATTGGGTGAGAGCACGAGGACACCGGAGACACCCGACTGA 612 0.531 MDVDTDSHNNKCAHNGKVLLGSATLLFLIFILIIFLHTYSYSCFRRRHPQRRHRHNRPLFPNSTADPHTALEPSLFKFLPTFTYSSATHLHLQECAVCLSEFEEDEVGRVLPNCNHCFHTHCIDTWFRSHSNCPICRALVQPPKISSQKVEAAVSDGEFAGCSYLPPPTSCPRKELDFDVLSMIVEASKEELGESTRTPETPD 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0399 203 SUPERFAMILY RING/U-box 80 143 - -
Lele07g0399 203 SMART ring_2 95 136 IPR001841 -
Lele07g0399 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 143 IPR013083 -
Lele07g0399 203 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Lele07g0399 203 Pfam Ring finger domain 94 137 IPR001841 -
Lele07g0399 203 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 141 IPR044675 -
Lele07g0399 203 CDD RING-H2_PA-TM-RING 94 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0399 Lele-ChrLele07 2257294 2257905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0399 7 141 Rapid Response to Elicitors AT3G16720 46.259 1.55e-35 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0200 06 1231189 1231869 Lele07g0399 07 2257294 2257905 hybridization