Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0396 ATGAAAGTGGAAGGAGTGTTCCAAGGGGTGTGGAAGCAGAGCAGAGAAGATGCCCATACCGTGACGGAGAGCAGAGGAGAGAACGTTATCCGTTTCGCTTGGTGTTACATATCTATACGGAATTCGTATTATGGATATGCATACAGAAACAGAATCGAAGATTATGAAAATGGTAAAGCTCAAATGAAGCGGGCTGCGATTTTCTCGAGGAGAGGCGGTGACTTTGCAGTTCAAGATGGAAATGCCGGTGCTGTGAATGCCGATAGGTCTGCACTGTTTCCCAGAGCCACGGCTTGGTTGGAATGCCTTCAGACAACGGCTTCAGATGCAAGAGTAAAGCATGATCTCTCCACCCCACTCTTGAACGACTCCAACCTTCAAAGCATCTCTCTTGCTCTGTTCGTGAAGGGTTGGGTCCCTGAAAAGAAAATCAGACCATCATCTTGGCACAATGGTGGAAGAAATTTAGGGTTCCAAAACGGAAGTTTGCCGGCGTTGGAGCTGTCAAGGCCAGCACGTGACATATATGAACGTAAACATATACAAAAACAAATGGAACTTGATCCTTCTGGTAGAGGGAATCAATCGCACATTGTGGTAGGACAAGGATTCGTAGCTGCGAACATAACATTCAGAGACACGGCAGGGCCAAGCAAAAGGCAAGCGGTGGCATTAAGAAGTGGAGCAGACATGTCTGTTCTCTACAGCTGCAGTTTCGAGGGGTACCAAGATACTCTGTATACGCATTCCATGAGGCAATTCTACAGAGAATGTGACATATATGGAACGGTCGACTTCATATTCGGGAACGCGGCTGTTGTATTAGAAAACTGCAACATACATCCACGCTTGCCCATGAGTATACAGTTCAAGGCTATCACAGAACAGGGTCGAACCGACCCGAACCAGAACACGGGCATTTCCATACAAAAAGCCACTATAAGGGCTGCGGACGATCTCACGAATGCTCTGCAGAACGTCACTGTGAGGACTTACCTGGGGAGGCCATGGAAGCAGTACTCGAGGGGACCCGGTTCGGATGCTTTGAACAGAGTGACGTGGCCTGGTTACCATCTGATTAATGCAACGGATGATGCCGCCAATTTCACGGCGGTTAACTTCCTGCAAGCCGATGCATGGGTGCCGCGCACCGGCGTGCCCTTCTTCTCCGGTTTGATTTAG 1182 0.4882 MKVEGVFQGVWKQSREDAHTVTESRGENVIRFAWCYISIRNSYYGYAYRNRIEDYENGKAQMKRAAIFSRRGGDFAVQDGNAGAVNADRSALFPRATAWLECLQTTASDARVKHDLSTPLLNDSNLQSISLALFVKGWVPEKKIRPSSWHNGGRNLGFQNGSLPALELSRPARDIYERKHIQKQMELDPSGRGNQSHIVVGQGFVAANITFRDTAGPSKRQAVALRSGADMSVLYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLENCNIHPRLPMSIQFKAITEQGRTDPNQNTGISIQKATIRAADDLTNALQNVTVRTYLGRPWKQYSRGPGSDALNRVTWPGYHLINATDDAANFTAVNFLQADAWVPRTGVPFFSGLI 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0396 393 ProSitePatterns Pectinesterase signature 2. 260 269 IPR033131 -
Lele07g0396 393 PANTHER PECTINESTERASE 198 342 - -
Lele07g0396 393 Gene3D - 175 392 IPR012334 -
Lele07g0396 393 Pfam Pectinesterase 199 342 IPR000070 GO:0030599|GO:0042545
Lele07g0396 393 SUPERFAMILY Pectin lyase-like 193 391 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0396 Lele-ChrLele07 2243354 2246962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0396 199 393 Carbohydrate Esterase AT1G02810 60.515 3.86e-89 278