Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0380 ATGATATCCGACGCCATTTCTACGCTGAACGATCGCACGGGTTCCAGTCAACAGGCAATTGCCAAGTTCATCGAGGACCAACACAAGCCACTGCTTCCCCCAAATTTCAGGACACTCCTTTCTGTTCAACTCAAGAAGTTTGTCAAGTCGGAGAGGCTGTTCAAGGTCAATAATTCCTTCAAGATCTCCTCCTCGGAGAACAAGACCGCCAAACCAAGTAAGAAGGGTGCAACGCTTGCGCAGAAGGCTGCCAAGAAGACCACAGAGAAGGGGCTGAAGACCAAGAGGCTGAGTCACGTGAAGACGCCGGAGGCTCTCCAGAAGGCCCACAAGGATACTAAGAAGAAGCCGATAGCCTCGTCGGCTGGGAAAGACCAGAAAGTGAAGCGCCTGAGTCAGGTTAAGACTCCCGACGCAATGAAGAAGAAGACCAAAGTTACCCCTATGAAGAGGAAGAGTACTTCTACACCCATCAAGTCTACCAGGCCCACGAAGAAGGCCAAGAAATAG 510 0.5098 MISDAISTLNDRTGSSQQAIAKFIEDQHKPLLPPNFRTLLSVQLKKFVKSERLFKVNNSFKISSSENKTAKPSKKGATLAQKAAKKTTEKGLKTKRLSHVKTPEALQKAHKDTKKKPIASSAGKDQKVKRLSQVKTPDAMKKKTKVTPMKRKSTSTPIKSTRPTKKAKK 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0380 169 MobiDBLite consensus disorder prediction 86 144 - -
Lele07g0380 169 PANTHER HISTONE H1 1 164 - -
Lele07g0380 169 MobiDBLite consensus disorder prediction 60 74 - -
Lele07g0380 169 MobiDBLite consensus disorder prediction 60 169 - -
Lele07g0380 169 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 1 64 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele07g0380 169 CDD H15 1 75 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele07g0380 169 SMART h15plus2 1 59 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele07g0380 169 Pfam linker histone H1 and H5 family 1 62 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele07g0380 169 Gene3D - 1 77 IPR036388 -
Lele07g0380 169 SUPERFAMILY "Winged helix" DNA-binding domain 1 73 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0380 Lele-ChrLele07 2146648 2147157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0380 1 62 Single Myb Histone (SMH) Gene Family AT1G72740 40.323 2.12e-09 53.1