Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele07g0366 | ATGATATTCATAACGTGGACAGCACAGTTTCTAGCTGGTCTCAATTTCAAAGAGAGAGAGGGAGACAGAAGACAGAGTAACAGAAAGAATTTGAAAAAACAAACGAAGCTGTTCCCTGAAACAGAGAGAAGAAGGTGGGAGAAAAATATGGAAGAAGTAGTATTATTGGTTGACGATTTAAAATTACTTTCCGGGATTCCTCGCTGTAGAATATGCCACGAAGAAGAATTTGAAAGCTCCGAAAACCTTGAAGCTCCCTGTGCTTGTTCTGGCACCGTTAAGTTTGCTCACAGAGATTGCGTACAGAGATGGTGCAACGAGAAAGGAAACACAACTTGCGAAATATGTCTTCAGCAATATGAACCTGGATATACAGCACCCCAAAAGAAATCTCAGATAAATGACGAGGCTTTGACAATCAGGGATAGCCTGCAAATTCCAAGGGATGAGGAACCGTTAAGCGCAAGATTAGAGGGTGGCGACGAAGGAATCACAACAGAAGGAGATTACTCTCAGTGCACGTCTACTGCTGATAGAAGTGCATCTTGCTGCAGATCACTGGCTTTAACTTTTACACTCATGTTGCTTGTGAGACATCTTTTCGTAGTGCTTACAAGTACAGAGGAAGACTACCCATTTTCACTTTTGACGGTGTTTATACTAAAAGCAAGCGGCATCATTCTACCCATGTACATAATCATGTGGGCGATCGGAGGCATATATGGCAGTATTCGACGTCACTACCAGGATTCTGACGACGACGACACGTCAATATTCGACAGTGAAGATGAAGAGAGGGAGCTGATTCATGATACCATTGTTCCACATCAATAA | 834 | 0.4257 | MIFITWTAQFLAGLNFKEREGDRRQSNRKNLKKQTKLFPETERRRWEKNMEEVVLLVDDLKLLSGIPRCRICHEEEFESSENLEAPCACSGTVKFAHRDCVQRWCNEKGNTTCEICLQQYEPGYTAPQKKSQINDEALTIRDSLQIPRDEEPLSARLEGGDEGITTEGDYSQCTSTADRSASCCRSLALTFTLMLLVRHLFVVLTSTEEDYPFSLLTVFILKASGIILPMYIIMWAIGGIYGSIRRHYQDSDDDDTSIFDSEDEERELIHDTIVPHQ | 277 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele07g0366 | 277 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 63 | 127 | IPR013083 | - | |
Lele07g0366 | 277 | Pfam | Protein of unknown function (DUF3675) | 122 | 237 | IPR022143 | - | |
Lele07g0366 | 277 | CDD | RING_CH-C4HC3_MARCH | 69 | 116 | - | - | |
Lele07g0366 | 277 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 61 | 123 | IPR011016 | GO:0008270 | |
Lele07g0366 | 277 | Pfam | RING-variant domain | 69 | 116 | IPR011016 | GO:0008270 | |
Lele07g0366 | 277 | SUPERFAMILY | RING/U-box | 68 | 121 | - | - | |
Lele07g0366 | 277 | FunFam | E3 ubiquitin-protein ligase MARCH4 | 58 | 126 | - | - | |
Lele07g0366 | 277 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 56 | 247 | IPR033275 | - | |
Lele07g0366 | 277 | SMART | ringv_2 | 68 | 117 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele07g0366 | Lele-ChrLele07 | 2049907 | 2054404 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele07g0366 | 69 | 116 | C3H Transcription Factor Family | AT2G37950 | 42.857 | 2.75e-06 | 45.4 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele13g2127 | 13 | 28053595 | 28056587 | Lele07g0366 | 07 | 2049907 | 2054404 | CCT | |
Lele14g2051 | 14 | 26385519 | 26388638 | Lele07g0366 | 07 | 2049907 | 2054404 | CCT | |
Lele15g0284 | 15 | 1611901 | 1614906 | Lele07g0366 | 07 | 2049907 | 2054404 | CCT | |
Lele16g0299 | 16 | 1657363 | 1660486 | Lele07g0366 | 07 | 2049907 | 2054404 | CCT | |
Lele07g0366 | 07 | 2049907 | 2054404 | Lele07g0366 | 07 | 2049907 | 2054404 | ECH | |
Lele05g0347 | 05 | 1984574 | 1990111 | Lele07g0366 | 07 | 2049907 | 2054404 | hybridization | |
Lele06g0166 | 06 | 1011636 | 1014189 | Lele07g0366 | 07 | 2049907 | 2054404 | hybridization |