Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0365 ATGCTCCTATTTCCAAATTCTTCCATTGTTTTCCTCATAATTTCAATTAAGGCTGTAATTAATTCAATTCATATGCAATTGCATCGTCTTCTCTGCATTGCAACTACTTGCTCTTGTTTCGATGATAGTTGTCTTATCGTTGACGCCGTGCTGGTGGCTCCAGTGTTATTTCATGCATTCGAGATGATTCCTCAGTTGTCTGAAATCTCATACATTGGGATGGATGGTCTATTTTTCTCGTACTACACAGAACATGATCAAAATCTTGCAATTTACTCTAACTCTACATTTTCTTCAATCTCGGGTGCTTCAGGAATCATTTACTATGTTCAACCTGTAAATCTTGACACTGGAGGATTATATGGTGAAGCCGTAATATATAAGCACCCTGTTAATACAAGTTGGACCCAGGAAGCAGTCAACAGTTCCAACGGATATGCCTCATTGGGATACAAGTGGAGGGACAATAATCAGATTTTATACCTTAATTTGGTCAGAATCTCAAGAACAGGAGTTATCTCATTAGGACTTCCAACAGCCACAATTACTGACTTTGTCACTCCCACTAGGCGTCAAGGTGCAAGCTTGTATTTGGCTTCCAAAGATGGAAAAGTGCTTCTACAAGGAATCCAACATGCCCATATAGAATTCTATGATGATACGGCTTCCTTCTATTCATTGAAACCAAATGGTGAGCTATTGAGTTATCAGGGCACCGTCTCATGTAAGGCTGAAGCCATTGCTTCTGTTTTGAAAATGGGGGATGCTCACTATTTGACTCGCTGCTCATCAATTGATATAATGGGAGTAGAATTGGTGTACGTCTTGGCTATCCCCCAAAATCGATTGGTGACTTTTGTACATGAGAGTAGAAAAAGGGAATTGGTGTTAATGAGTACAATGATAGTGATGATATTGGTCTCTATCTTTAGTTTTCTTTTGTTAAATGCTATAATTGGTTGGCGAGAGATGCATTTGTGTGTCTCTCTCATCAAACAAATGGAAGCCACTCAGCAAGCAGAGAGGAAGAGTATGAATAAGAGCCTAGCATTTGCCAGTGCTAGCCATGATATTCGTGCTTTTCTTGCTGGCCTTACTGGTTTGATAGAGATGTCCTATGAAGAAGTTATCCCTGGTTCAGAACTAGAGGCCAATTTAAAACAAATGAGTGCTTGCACAGAAGACTTACTAGGGCTATTGAATTCTATTCTTGATACAAGTAAAATTGAGGCGGGGAAAATGCAGCTTGATGAAGAGGAATTTGATCTATCCCAGGTCATAGAAGAAGCAATTGATTGGTATTATCCTGCGGCTATGAAAAAAGGTGTCGACCTTGTCTTGGACCATTGTAATGGTTCGGTTGTCAGATATTCGCATGTCAAAGGTGACAAAGGAAAGCTTAAACAAGTTTTGTATAATTTAGTAAGCAATGCTGTTAAATTTACAGATGAGGGGCATATATCAGTTCGAGCATGGGCTCAAAAGCCAGGTTTCCAGAACTCAATAATGGCTTCTAAAAGATACAATTTTAGCAAGCATTTGCCATGCTTATTTTACAAGAAAAATGAATCAGATGGAGAAGTAGAAGTAAGAAATGCAACCCAACAAGATCCAAACTTGTTGCAGTTTGTGTTTGAAGTAGATGATACTGGAAAAGGAATTCCTAAAGAGAAGCATAAGTCAGTGTTTGATAATTATGTTCAATTCAAAGAAAATGCTTCAGGACTTGGAGGCACTGGTTTGGGACTTGGTATTGTGCAATCACTGGTACGTTTGATGCATGGGGACATTGAAATTGTGGAAAAGGAAATAGGTGAAAGAGGATCATGCTTTAGATTCAATGTCCTCCTTCAAGTATGTGAGACAGTCACAGGAGTAGACATAAATCTCAATCAACCACAAGGACAAGCTATAAACGCCCCTAGTTCTGGTTCTAGCATATGTTCCCCTAGCCAAAAATTGCCTAATTTTGCCTCTAGTAGGTCAGGGGCTTCTTGCATTATTCTTCTGATACAAAACAAAGAGCGACGGAAGACTACTAGAAGGTTCATGGAGAGCTTAGGGATTAGAGTTAAGGTTGTGAAGCAGTGGGAACATTTGTCTCATACTCTTAAGAAGATCAAGCAAAAGGGGCATAATTCTAGCCAGAGCTCCATAGGAACATCAAACTCTAGTTCTAGGTCTACATCTCAAAATTCTAATTCCAGGGCCAAAGGATTTCCTTTGAGTGCTACTGATGGAATTGACTATATGCCTTCGATTTTTAATAAATCAGAAGATAGAGCTTCCTTGGGTTTGGTTCTGCTTGTGATTGATTCAATTGCAGGACCCTTTTCAGAACTTAGCAAAATGGTGTTTGCATTCAAAAAAGACCTTGGGAGTCCTTGCAAGGTGGTCTGGTTAAATAAGCCACTTGTGACTGGAGACAATTCCAAAGCACTCGATGAAGACGCATTAGATCCTGATGACATTATCTTGTCCAAGCCATTTCATGGTAGTCGTTTGTTTGAAATTATAAGGCTTCTTCCCGAGTTTGGTGGTAATTCAACTAATATATCTAGAATTGGAAGAATAAGGAGGGAAATTTTTCACGATAGACTTAAGAAACCATTGAAAGATTCCCACATGTCAAGATATCAGTCACCTATATCAGACACAGCAGAATTTTCCTCAGCTAATGCAACCCCATTTCAGGACCATGCTAGTTCATCGAGGAGGGATCAACTGCATTCTTCAAGTAGGTCCAAAGCAAGGAATTCTCGAATCAGCCACAAAGAGATACAGGAGTGCAATGATTCAACCAATGACAAGCCCTTGTGTGGCAAGAAATTTTTGATTGCTGAGGACGTTGAATATCTACGCAGGATAGCTTTTAAGACTTTGATACAGCTAGGTGCAAGTGCAGCTAACGTGAAGGAATGCAAGAATGGCGAAGAAGCAGTGAATCTAGCTGAAGAGAGTTTAAAAGGGGCTTTTCCTTATGATTACATCATAATGGACTGTGAGATGCCAGTAATGAATGGATTTGAGGCAACAAAGCAGATAAGGAAGATGGAGAAGAGGTATGGGGTTCACATACCTATCTTGGCCTTAACAGCTCATACGTCAGGGGAGGAGATCAGAATGACCAAGGAGGCAGGAATGGACGCTCATTTAGACAAGCCACTTAGAGCACACCATTTACTGGCTGCCATAAAAAACATACACAATAATACAGACTGA 3222 0.3991 MLLFPNSSIVFLIISIKAVINSIHMQLHRLLCIATTCSCFDDSCLIVDAVLVAPVLFHAFEMIPQLSEISYIGMDGLFFSYYTEHDQNLAIYSNSTFSSISGASGIIYYVQPVNLDTGGLYGEAVIYKHPVNTSWTQEAVNSSNGYASLGYKWRDNNQILYLNLVRISRTGVISLGLPTATITDFVTPTRRQGASLYLASKDGKVLLQGIQHAHIEFYDDTASFYSLKPNGELLSYQGTVSCKAEAIASVLKMGDAHYLTRCSSIDIMGVELVYVLAIPQNRLVTFVHESRKRELVLMSTMIVMILVSIFSFLLLNAIIGWREMHLCVSLIKQMEATQQAERKSMNKSLAFASASHDIRAFLAGLTGLIEMSYEEVIPGSELEANLKQMSACTEDLLGLLNSILDTSKIEAGKMQLDEEEFDLSQVIEEAIDWYYPAAMKKGVDLVLDHCNGSVVRYSHVKGDKGKLKQVLYNLVSNAVKFTDEGHISVRAWAQKPGFQNSIMASKRYNFSKHLPCLFYKKNESDGEVEVRNATQQDPNLLQFVFEVDDTGKGIPKEKHKSVFDNYVQFKENASGLGGTGLGLGIVQSLVRLMHGDIEIVEKEIGERGSCFRFNVLLQVCETVTGVDINLNQPQGQAINAPSSGSSICSPSQKLPNFASSRSGASCIILLIQNKERRKTTRRFMESLGIRVKVVKQWEHLSHTLKKIKQKGHNSSQSSIGTSNSSSRSTSQNSNSRAKGFPLSATDGIDYMPSIFNKSEDRASLGLVLLVIDSIAGPFSELSKMVFAFKKDLGSPCKVVWLNKPLVTGDNSKALDEDALDPDDIILSKPFHGSRLFEIIRLLPEFGGNSTNISRIGRIRREIFHDRLKKPLKDSHMSRYQSPISDTAEFSSANATPFQDHASSSRRDQLHSSSRSKARNSRISHKEIQECNDSTNDKPLCGKKFLIAEDVEYLRRIAFKTLIQLGASAANVKECKNGEEAVNLAEESLKGAFPYDYIIMDCEMPVMNGFEATKQIRKMEKRYGVHIPILALTAHTSGEEIRMTKEAGMDAHLDKPLRAHHLLAAIKNIHNNTD 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0365 1073 MobiDBLite consensus disorder prediction 710 740 - -
Lele07g0365 1073 Gene3D - 329 413 - -
Lele07g0365 1073 PANTHER TWO-COMPONENT HISTIDINE KINASE 19 1066 - -
Lele07g0365 1073 CDD HisKA 347 408 IPR003661 GO:0000155|GO:0007165
Lele07g0365 1073 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 334 414 IPR036097 GO:0000155|GO:0007165
Lele07g0365 1073 CDD REC_hyHK_CKI1_RcsC-like 944 1065 - -
Lele07g0365 1073 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 617 IPR003594 -
Lele07g0365 1073 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 401 614 IPR036890 -
Lele07g0365 1073 SMART HisKA_10 346 412 IPR003661 GO:0000155|GO:0007165
Lele07g0365 1073 MobiDBLite consensus disorder prediction 894 932 - -
Lele07g0365 1073 Gene3D - 414 624 IPR036890 -
Lele07g0365 1073 SMART REC_2 942 1065 IPR001789 GO:0000160
Lele07g0365 1073 Pfam Response regulator receiver domain 945 1066 IPR001789 GO:0000160
Lele07g0365 1073 PRINTS Bacterial sensor protein C-terminal signature 577 595 IPR004358 GO:0016310|GO:0016772
Lele07g0365 1073 PRINTS Bacterial sensor protein C-terminal signature 543 557 IPR004358 GO:0016310|GO:0016772
Lele07g0365 1073 SUPERFAMILY CheY-like 941 1069 IPR011006 -
Lele07g0365 1073 SMART HKATPase_4 462 619 IPR003594 -
Lele07g0365 1073 ProSiteProfiles Histidine kinase domain profile. 353 619 IPR005467 -
Lele07g0365 1073 MobiDBLite consensus disorder prediction 705 740 - -
Lele07g0365 1073 MobiDBLite consensus disorder prediction 903 932 - -
Lele07g0365 1073 Gene3D - 919 1072 - -
Lele07g0365 1073 ProSiteProfiles Response regulatory domain profile. 943 1069 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0365 Lele-ChrLele07 2044749 2049867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0365 52 1070 Histidine Kinase Gene Family AT2G47430 40.037 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele07g0365 HATPase_c 1.5e-25 CL0025