Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0362 ATGAAGGACCTGGACTTCAATGCAGACGTAGCTCTGGCAAAGGAGTTCCTTTCGAACTTCGCAGATGCAAACGGTGAAGCCAAATATATGAACATCTTGCAAGACATTGCTAACCACAAAACTCGAGCTATCCAAATTGATATTGGGGACTTGATCAATTATAAAGATCTAGACGAAGAATTTCTCAGACGTGTGACTGATAATACTCGGAGGTACATTGGAATTTTTGCCGATGCGATCGATGGCCTTATGCCAGAGCCCACTGAAGCCTTTACGGATGACGATCATGATATATTGATGACTCAAAGATCTGACGAAGGAGCGGAAGGTGCTGACGGTTCAGATCCTCTTCAAAAGATGCCTTCTGAGATCAAGCGCTACTTTGAAGTTTATATTAAGGCGTCTTCAAAAGGGCGGCCATTTACAATTAGGGAGGTGAAGGCTTCATATATTGGTCAGCTTGTAAAGATATCTGGTATTGTGACACGATGTTCGGATGTTAAACCATTGATGCAGGTAGCTGTTTACACATGTGAGAATTGTGGTTTTGAAATTTATCAGGAAGTAACAGCTCGAGTTTTCATGCCTTTGTTTGAGTGCCCCTCTAAGCGCTGTCATATGAATCAAAGCAAGGGGAATCTCATCCTTCAACTAAGAGCATCGAAGTTCTTGAAATTTCAGGAGGCAAAAATTCAAGAACTAGCTGAACATGTTCCAAAAGGACATATCCCCCGAACAATGACTGTTCATTTCAGGGGAGATCTCACAAGAAAGGTGGCTCCAGGTGATGTTGTTGAATTATCTGGCATTTTTCTTCCCATACCCTTCACTGGTTACAGAGCAATGCGTGCTGGGCTAGTTGCTGATACTTACTTAGAGGCCATGTCTGTTACCCATTTCAAGAAAAGATATGAAGAGTATGAATTTTTAGGAGATGAAGAACAGCAGATTTTAAAATTAGCTGAAGACGGTGACATCTACAACAAGTTGGCTAGATCATTGGCTCCTGAAATTTTTGGACATGAAGATATCAAGAAAGCATTGCTGCTTCTTCTTGTTGGTGGTCCCCACCGGAAGTTAAAAGATGGGATGAAGATAAGAGGAGATTTGCATATATGTCTGATGGGTGATCCTGGTGTGGCAAAGAGTCAGCTCCTTAAACACATAATTAACGTAGCACCAAGAGGAGTGTACACCACTGGCAAAGGAAGTAGTGGTGTAGGTCTAACTGCTGCTGTTCAGAAGGATCCAGTGACCAATGAAATGGTTCTGGAAGGCGGAGCATTGGTACTAGCAGATATGGGCATTTGTGCCATTGATGAGTTTGACAAGATGGATGAATCTGATCGTACAGCTATACATGAAGTTATGGAACAGCAGACTGTTAGCATTGCCAAGGCCGGGATCACTACATCCTTGAATGCAAGGACAGCAGTCCTTGCTGCTGCCAATCCAGCATGGGGAAGATATGATCTAAGAAGAACTCCTGCAGAAAATATTAATCTTCCTCCTGCCCTGCTATCAAGATTTGATCTTCTGTGGCTAATCCTTGATCGAGCTGATATGGATAGTGATCTTGAAATGGCTAGGCATGTCGTCTATGTCCACCAAAATAAAGAATCTCCTGCTCTGGGATTCACTCCTCTTGAACCAGCTGTTCTCCGAGGATACATATCAACTGCAAGAAGATTATCTCCTAGTGTCCCCAGGGAATTGGAAGAGTACATTGCCACTGCTTACTCTAGCATTCGCCAAGACGAAGCCAAGTCCAGTACTCCCCATTCCTACACAACTGTCAGAACTTTGCTCAGTATTCTCCGCATATCAGCTGCATTAGCAAGACTCCGTTTTTCGGAAACCATTGCTCAGAGTGACGTGGACGAGGCACTGAGGTTAATGCAGATGTCGAAGTTCTCATTATACTCTGATGAGCGTCAAAGATCGGGTCTGGATGCTATATCTGATATCTATTCTATTCTGCGAGATGAAGCTTCTAGGAGTAACAGAATGGACGTAAGCTACGCCCGCGCCCTCAATTGGATATCTAGGAAGGGTTACAGCGAAGCACAATTGAAAGAGTGTTTGGAGGATTTGGATAAAATTGGAGGCGCTGATTGTGTTGCTTCTTATCAATTAGGATTTGCCTCAACTAGAAGTCAGGTTGAATCTGAACGGACTCGGTCATCCGGAGACTGA 2196 0.4349 MKDLDFNADVALAKEFLSNFADANGEAKYMNILQDIANHKTRAIQIDIGDLINYKDLDEEFLRRVTDNTRRYIGIFADAIDGLMPEPTEAFTDDDHDILMTQRSDEGAEGADGSDPLQKMPSEIKRYFEVYIKASSKGRPFTIREVKASYIGQLVKISGIVTRCSDVKPLMQVAVYTCENCGFEIYQEVTARVFMPLFECPSKRCHMNQSKGNLILQLRASKFLKFQEAKIQELAEHVPKGHIPRTMTVHFRGDLTRKVAPGDVVELSGIFLPIPFTGYRAMRAGLVADTYLEAMSVTHFKKRYEEYEFLGDEEQQILKLAEDGDIYNKLARSLAPEIFGHEDIKKALLLLLVGGPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLEMARHVVYVHQNKESPALGFTPLEPAVLRGYISTARRLSPSVPRELEEYIATAYSSIRQDEAKSSTPHSYTTVRTLLSILRISAALARLRFSETIAQSDVDEALRLMQMSKFSLYSDERQRSGLDAISDIYSILRDEASRSNRMDVSYARALNWISRKGYSEAQLKECLEDLDKIGGADCVASYQLGFASTRSQVESERTRSSGD 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0362 731 CDD MCM7 329 636 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele07g0362 731 ProSitePatterns MCM family signature. 435 443 IPR018525 GO:0003677|GO:0005524|GO:0006260
Lele07g0362 731 Gene3D - 311 643 IPR027417 -
Lele07g0362 731 SUPERFAMILY Nucleic acid-binding proteins 13 294 IPR012340 -
Lele07g0362 731 Gene3D - 10 100 - -
Lele07g0362 731 Pfam MCM N-terminal domain 14 133 IPR027925 -
Lele07g0362 731 Pfam MCM P-loop domain 314 536 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele07g0362 731 Gene3D - 170 224 - -
Lele07g0362 731 Gene3D - 143 271 IPR012340 -
Lele07g0362 731 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 14 652 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele07g0362 731 Pfam MCM OB domain 143 273 IPR033762 -
Lele07g0362 731 PRINTS Mini-chromosome maintenance (MCM) protein family signature 455 468 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele07g0362 731 PRINTS Mini-chromosome maintenance (MCM) protein family signature 367 382 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele07g0362 731 PRINTS Mini-chromosome maintenance (MCM) protein family signature 427 441 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele07g0362 731 PRINTS Mini-chromosome maintenance (MCM) protein family signature 479 491 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele07g0362 731 PRINTS Mini-chromosome maintenance (MCM) protein family signature 506 514 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele07g0362 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 645 IPR027417 -
Lele07g0362 731 FunFam DNA replication licensing factor MCM7 9 100 - -
Lele07g0362 731 FunFam DNA replication licensing factor MCM7 311 643 - -
Lele07g0362 731 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 158 169 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele07g0362 731 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 193 205 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele07g0362 731 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 176 187 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele07g0362 731 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 285 295 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele07g0362 731 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 120 132 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele07g0362 731 FunFam DNA replication licensing factor MCM7 170 224 - -
Lele07g0362 731 Pfam MCM AAA-lid domain 553 636 IPR041562 -
Lele07g0362 731 ProSiteProfiles MCM family domain profile. 326 532 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele07g0362 731 SMART mcm 139 638 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0362 Lele-ChrLele07 2011763 2027229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0362 1 697 Core DNA Replication Machinery Family AT4G02060 83.357 0.0 1225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0362 07 2011763 2027229 Lele07g0362 07 2011763 2027229 ECH
Lele05g0344 05 1958086 1963151 Lele07g0362 07 2011763 2027229 hybridization
Lele06g0163 06 986076 991107 Lele07g0362 07 2011763 2027229 hybridization