Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0360 ATGGCCAAGAAGTCTGTCTGGGCTGGTGCTCCTATATATTTTACTGGGAAAGAACGAAATCGGGTCTTTGATAGTCAGGTTTCTAGGGTTTCAGTTGGTTATCATAGTTTGGGTTTGATTTATCTCACAATCCAGTTTCGATTAATTATTATCAATCGCCCATTCGAATACGCTGTTCGATTAGTAAATCCTTTTGTAAGTTATAGGGAAATGGCTTCGAATCACCGTCCAGCAAGTTCGGGATCTGATGACCCAAGATCTGATGTTGTGGACGATAGGAAGAGGAAGAGGATGCAGTCTAACCGTGAATCCGCGAGGCGATCGCGGATGAAGAAGCAGAAGCAACTGGAAGATCTGACCAATGAGATCAGCCGATTGCAAAGTGCAAACAGTCAATTAGTTCAGAACATAAAGGAAAAGGAGGATGCATACAATGAGATCGAATCCAACAACTCTGTCCTTAGGGCGCAGACTACTGAGTTGTTCGAACGATTGCGTTTTCTGAACTCGATACTTGAGATCGCTGAAGAGGTCAGCGGGTTCTCTGTTGAGATCCCCGAGATACCAGATCCTCTCCTGAAGCCATGGCAGCTTCCTTATCCGATACAGCAGATCACGGCTTCTTCAAACTTCGTCCTGCATTGA 645 0.4496 MAKKSVWAGAPIYFTGKERNRVFDSQVSRVSVGYHSLGLIYLTIQFRLIIINRPFEYAVRLVNPFVSYREMASNHRPASSGSDDPRSDVVDDRKRKRMQSNRESARRSRMKKQKQLEDLTNEISRLQSANSQLVQNIKEKEDAYNEIESNNSVLRAQTTELFERLRFLNSILEIAEEVSGFSVEIPEIPDPLLKPWQLPYPIQQITASSNFVLH 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0360 214 Pfam bZIP transcription factor 93 151 IPR004827 GO:0003700|GO:0006355
Lele07g0360 214 PANTHER BZIP TRANSCRIPTION FACTOR 44 78 175 - -
Lele07g0360 214 MobiDBLite consensus disorder prediction 73 117 - -
Lele07g0360 214 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 96 111 IPR004827 GO:0003700|GO:0006355
Lele07g0360 214 CDD bZIP_plant_GBF1 94 145 IPR045314 GO:0003700|GO:0006355
Lele07g0360 214 Coils Coil 102 157 - -
Lele07g0360 214 MobiDBLite consensus disorder prediction 81 117 - -
Lele07g0360 214 Gene3D - 92 146 - -
Lele07g0360 214 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 91 154 IPR004827 GO:0003700|GO:0006355
Lele07g0360 214 FunFam BZIP transcription factor 91 142 - -
Lele07g0360 214 SUPERFAMILY Leucine zipper domain 93 142 IPR046347 GO:0003700|GO:0006355
Lele07g0360 214 SMART brlzneu 89 153 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0360 Lele-ChrLele07 2001905 2003249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0360 71 211 bZIP Transcription Factor Family AT3G62420 53.846 2.55e-46 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele07g0360 bZIP_1 1.4e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0360 07 2001905 2003249 Lele13g2120 13 28016581 28016955 CCT
Lele07g0360 07 2001905 2003249 Lele15g0292 15 1650909 1651283 CCT
Lele07g0360 07 2001905 2003249 Lele16g0305 16 1694369 1694881 CCT
Lele13g2130 13 28073026 28076132 Lele07g0360 07 2001905 2003249 CCT
Lele14g2055 14 26403677 26406177 Lele07g0360 07 2001905 2003249 CCT
Lele15g0281 15 1593307 1596548 Lele07g0360 07 2001905 2003249 CCT
Lele16g0296 16 1639541 1650490 Lele07g0360 07 2001905 2003249 CCT
Lele07g0360 07 2001905 2003249 Lele07g0360 07 2001905 2003249 ECH
Lele07g0360 07 2001905 2003249 Lele08g0164 08 1006112 1006546 ECH
Lele05g0342 05 1943836 1944676 Lele07g0360 07 2001905 2003249 hybridization
Lele06g0161 06 975025 975459 Lele07g0360 07 2001905 2003249 hybridization