Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0356 ATGGATGGCACTGCATCCCCAAAACTTGACTCAGAAGCATCTCCAGTCAACGCAAAAGAAGCTCAACCACTCAAAAAACGGAAAACAGTTCAGAGAACAGTTGTGACAGTGAGAGTTGGAGAAAATGAAAGCAAACTCAAGAACGAAGGGCTGGCTCCTGATTCCTGGTGTTGGAGAAAATATGGACAAAAGCCTATTAAAGGATCTCCTTACCCAAGGGGTTACTACAGGTGCAGCACATCCAAGGGTTGTTCGGCCAGAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCTATGCTCATCTTTACTTATACCTCGACTCATAACCATCCACCTCCTGCTCGTCCCTCCAACTCCAATCTAAACCTACCACAGAAATCCCCAAACCAGACCGTTGAAGATCTCCCAGCGACCTCGAAAGTGGAAGAGCAAGAAGTGAAAGAAAGGGAGAAGGATAATAAGCCAACGACGGGCCGTGATCAATGTGTGAAGGAAGAAAATTTCTATTACTTGCAATCGCCAACTCAGTGCTCTCAAGACATCATTGTTGACCAGGAAGATCCTTTCGAGGTGAACCCAGAGAAAACACATGGTAGAATAGATCTCCTCCTAGAAAAAGGGCTACCGAGTTATTCTCATTTCGAGAACCCGGCAACCCCCAAATCCGAAGAACATGACTTTTTCGATGAACTTGAAGAGCTACCCATATCATCACCTTTCTTAAACTTAATGAGGAGAAATGTCTCAGAGGAAAGGATTGTGGTTGCCCCTTCATGA 777 0.4505 MDGTASPKLDSEASPVNAKEAQPLKKRKTVQRTVVTVRVGENESKLKNEGLAPDSWCWRKYGQKPIKGSPYPRGYYRCSTSKGCSARKQVERCRTDASMLIFTYTSTHNHPPPARPSNSNLNLPQKSPNQTVEDLPATSKVEEQEVKEREKDNKPTTGRDQCVKEENFYYLQSPTQCSQDIIVDQEDPFEVNPEKTHGRIDLLLEKGLPSYSHFENPATPKSEEHDFFDELEELPISSPFLNLMRRNVSEERIVVAPS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0356 258 MobiDBLite consensus disorder prediction 138 160 - -
Lele07g0356 258 MobiDBLite consensus disorder prediction 1 29 - -
Lele07g0356 258 Gene3D WRKY domain 41 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g0356 258 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g0356 258 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 19 240 IPR044810 GO:0003700
Lele07g0356 258 SUPERFAMILY WRKY DNA-binding domain 50 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g0356 258 MobiDBLite consensus disorder prediction 105 137 - -
Lele07g0356 258 FunFam WRKY transcription factor 65 26 113 - -
Lele07g0356 258 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g0356 258 ProSiteProfiles WRKY domain profile. 47 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g0356 258 MobiDBLite consensus disorder prediction 105 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0356 Lele-ChrLele07 1985874 1986897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0356 23 120 WRKY Transcription Factor Family AT1G29280 60.000 2.59e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele07g0356 WRKY 3.3e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0356 07 1985874 1986897 Lele07g0356 07 1985874 1986897 ECH
Lele05g0338 05 1930406 1931432 Lele07g0356 07 1985874 1986897 hybridization
Lele06g0157 06 957880 958876 Lele07g0356 07 1985874 1986897 hybridization