Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0354 ATGGAGTTCAACAGAAAAATCATCCCCGTGGTTCCCCTGATCTGTTGCTGGCTCCTTTCGGCCATCGACGCCGTTCCCTCGACTCGCTTCAAGCTGTCGGAAGAGCCTCCGTCGGCAGCCCCAGCTCCGTCTCCCTCCGACGTCGAAGTCAGCACTGTGTATGTTAACACAGGGGCGTCGCAGCAAGACGCCCAGTTGGTAGCTCTGTGCAAGGACGCGGACGCGCCATCTCTGTGCGTGGAGACCATCGCGCCATTCATCCATGGTGCACTTGACCCCGTGGTGGCCGTTAAGGCCGAAATGGGGGCGACCATGAACATCACTTTGAAGGTCTCTGAAACAATCAAGACTTTGCGGGCCAAACCAACTCTCACTCCAGACGACATAGCGTCACTGGACATATGCGCAGACCAGTACGCTTCGATTGAGGATACCATAAATGATTGTTTGGATTCCATCAAGCAGAACGACGTGTACGGTGCTTGGATGAAGTTCTCGTCGGTGCTGTCGTTCCAACAGGCATGTGAAGATGGTTTTAAGGAAGGTGGCTCGCCCATTCCCTTCCCGGAGGATTCCAAGACTCTGTTCCAGTTGGGTGGTAATTGCTTGGCCATCCTCATGCATCTTTCTGGTGAAACCTCGTCTTATTAA 651 0.5392 MEFNRKIIPVVPLICCWLLSAIDAVPSTRFKLSEEPPSAAPAPSPSDVEVSTVYVNTGASQQDAQLVALCKDADAPSLCVETIAPFIHGALDPVVAVKAEMGATMNITLKVSETIKTLRAKPTLTPDDIASLDICADQYASIEDTINDCLDSIKQNDVYGAWMKFSSVLSFQQACEDGFKEGGSPIPFPEDSKTLFQLGGNCLAILMHLSGETSSY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0354 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 59 210 - -
Lele07g0354 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 207 IPR035513 -
Lele07g0354 216 SMART PMEI_2 61 205 IPR006501 GO:0004857
Lele07g0354 216 TIGRFAM PME_inhib: pectinesterase inhibitor domain 60 209 IPR006501 GO:0004857
Lele07g0354 216 Pfam Plant invertase/pectin methylesterase inhibitor 68 205 IPR006501 GO:0004857
Lele07g0354 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 211 IPR035513 -
Lele07g0354 216 CDD PMEI-like_2 63 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0354 Lele-ChrLele07 1977083 1977733 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0354 07 1977083 1977733 Lele13g2129 13 28065575 28068867 CCT
Lele07g0354 07 1977083 1977733 Lele14g2054 14 26396476 26401957 CCT
Lele07g0354 07 1977083 1977733 Lele15g0282 15 1599773 1605223 CCT
Lele05g0336 05 1921540 1922190 Lele07g0354 07 1977083 1977733 hybridization