Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0341 ATGATAAGGCAGTCTGCAGCAAATCAAAGTGAAGACGATATGTGCGTGAGGAAAGGTCCATGGACTGTTGAAGAGGACACCATTCTCGCCAATTACGTAGTCACTCATGGCGAAGGTCGGTGGAATTTCGTCGCTCTCTGCTCAGGTCTGAATAGAACGGGCAAAAGTTGCAGATTGAGATGGCTGAACTACTTGCGTCCCGATGTTCGGCGGGGAAATATCACACTCCAGGAACAGATATTGATTCTCGACCTCCATTCTCGCTGGGGAAATAGGTGGTCTAAAATTGCGGAGCATTTGCCCGGAAGAACAGACAACGAGATAAAAAATTATTGGAGAACCAGAGTGATAAAGCAGGCGAAGCAGCTCAAGTGTGACGTCAACAGCAAACAGTTCAGAGACGCCATGAGTTACGTTTGGATCCCTCGCCTGCTGGAGCGGATTCGGGCCTCGTCCGAAGATCAACACGGTTCGGGAACAGAGTGGAGAAGACTCGATTACTCTTGCACCTCTATCTATGGGGGATCGGAGCTCCAAGTGGCTTCGAATTCGGACAGCAGCGAAACAACGGGACATCCAATAGGAAACGGGTCGGTGACCAAGACAGTAGAGCAGGGAGAGCCACCGGAGAATCTATGGAGCGATGAGAATATATGGTTTTTACGGCAACAACTTTGTGATGAGTTTTAA 690 0.4913 MIRQSAANQSEDDMCVRKGPWTVEEDTILANYVVTHGEGRWNFVALCSGLNRTGKSCRLRWLNYLRPDVRRGNITLQEQILILDLHSRWGNRWSKIAEHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDAMSYVWIPRLLERIRASSEDQHGSGTEWRRLDYSCTSIYGGSELQVASNSDSSETTGHPIGNGSVTKTVEQGEPPENLWSDENIWFLRQQLCDEF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0341 229 SMART sant 70 118 IPR001005 -
Lele07g0341 229 SMART sant 17 67 IPR001005 -
Lele07g0341 229 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Lele07g0341 229 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Lele07g0341 229 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 179 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele07g0341 229 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Lele07g0341 229 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Lele07g0341 229 ProSiteProfiles Myb-like domain profile. 17 65 IPR001005 -
Lele07g0341 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Lele07g0341 229 FunFam MYB transcription factor 75 138 - -
Lele07g0341 229 Gene3D - 75 116 - -
Lele07g0341 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Lele07g0341 229 MobiDBLite consensus disorder prediction 180 207 - -
Lele07g0341 229 MobiDBLite consensus disorder prediction 180 209 - -
Lele07g0341 229 FunFam Myb transcription factor 18 70 - -
Lele07g0341 229 CDD SANT 75 114 IPR001005 -
Lele07g0341 229 CDD SANT 20 65 IPR001005 -
Lele07g0341 229 Gene3D - 18 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0341 Lele-ChrLele07 1895251 1896209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0341 16 158 MYB Transcription Factor Family AT1G48000 72.028 5.75e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele07g0341 Myb_DNA-binding 1.4e-15 CL0123