Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0332 ATGGTGGCTGAAGCAGACGTTGTTTGCCAACAGAGCCTGCCTCTGTTGGATGTCCAGTATATTCCTAAAGCAAGCAGTATTCATGAGATCGAAGGTCCACCCTTCGTCTCGCCATTACCGGGGCCTCCCGGTCCTGACAAAGTTCGTGCTTCTGAAGCAGTCTCTGGCCAGTTATTTAGTTCAAAAGAAGATGTTATAGCTGCAAAACAAGTTCCCCATGCTTCTCTTGATTCTGCTGTTGTGCAGTTCGTACCCAGCATCCGTTCTGGTAGTTATGCTGACATTGGACCGCGTAGATACATGGAAGATGAGCATATAATGATCGATGATTTGTCTTCTCACCTGGGATCCCTTTATAAGTTCCCTAAATCCAGTGCCTTTTATGGGGTGTTTGACGGTCATGGAGGATCTGAAGCTGCAGTTTACATCCGTAAAAACGTGATAAGGTTTATTTTCGAGGAGGCCAGCTTCCCACAGGCATCTGAAGTTGATAATGTCTTGTTACAAGAATTAGAGAACTCCCTTAGGAAGGCGTTTCTTTTGGCCGACTCAGCTTTGGCTGATGATTGTAGTGTGAGTAGCTCATCAGGGACCACGGCGCTTACAGCTTTAATCTTTGGAAGGCTGTTGATGGTGATCAATGCTGGTGATTGTCGGGCGGTTCTTTGCCGCAAAGGGGAGGCAATTGACATGTCTCAAGATCACAGGCCTATATATCCATCGGAACGGAGGCGCGTTGAGGAATCAGGTGGTTTCATTGATGATGGTTATCTTAATGGGGTGTTATCAGTTACTCGAGCACTAGGGGACTGGGACATGAAGCTCCCACGGGGTTCTCCCTCACCTCTGATTGCAGAGCCAGAGTTTAGGCAAGTGGTTCTAACAGAGGACGATGAATTCCTTATCATAGGATGTGATGGAATTTGGGATGTTATGTCAAGTCAGCATGCAGTGAGTATTGTTAGGAGAAGCCTGAGGCGGCACGATGATCCTGAGAAGGGCGCAAGAGACTTAGTCATGGAAGCTTTGCGGCTGAATGCGTTTGACAATCTGACAGTAATTGTTGTGTGCTTCACATCCCCTGATCACAGGGAACTATCACCCTCTCAGAGGTTGAGCCGTTGTAGCCTCTCTACAGAAGCACTGGGTAGCTTGAGGAGTTTGTTGGAAGGTAGTGCTAGCAACTAA 1188 0.4747 MVAEADVVCQQSLPLLDVQYIPKASSIHEIEGPPFVSPLPGPPGPDKVRASEAVSGQLFSSKEDVIAAKQVPHASLDSAVVQFVPSIRSGSYADIGPRRYMEDEHIMIDDLSSHLGSLYKFPKSSAFYGVFDGHGGSEAAVYIRKNVIRFIFEEASFPQASEVDNVLLQELENSLRKAFLLADSALADDCSVSSSSGTTALTALIFGRLLMVINAGDCRAVLCRKGEAIDMSQDHRPIYPSERRRVEESGGFIDDGYLNGVLSVTRALGDWDMKLPRGSPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMSSQHAVSIVRRSLRRHDDPEKGARDLVMEALRLNAFDNLTVIVVCFTSPDHRELSPSQRLSRCSLSTEALGSLRSLLEGSASN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0332 395 Pfam Protein phosphatase 2C 98 350 IPR001932 -
Lele07g0332 395 PANTHER PROTEIN PHOSPHATASE 2C 81 356 IPR015655 GO:0004722|GO:0006470
Lele07g0332 395 ProSitePatterns PPM-type phosphatase domain signature. 127 135 IPR000222 GO:0043169
Lele07g0332 395 CDD PP2Cc 87 358 IPR001932 -
Lele07g0332 395 ProSiteProfiles PPM-type phosphatase domain profile. 88 358 IPR001932 -
Lele07g0332 395 FunFam Probable protein phosphatase 2C 22 72 361 - -
Lele07g0332 395 Gene3D - 74 365 IPR036457 -
Lele07g0332 395 SUPERFAMILY PP2C-like 82 359 IPR036457 -
Lele07g0332 395 SMART PP2C_SIG_2 103 358 IPR001932 -
Lele07g0332 395 SMART PP2C_4 78 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0332 Lele-ChrLele07 1853238 1855380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0332 101 391 PP2C-type Phosphatase Gene Family AT3G62260 69.388 1.20e-145 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Lele07g0332 PP2C 2.1e-65 CL0238